Diabrotica virgifera virgifera (western corn rootworm): 114345805
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Entry
114345805 CDS
T09922
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114345805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
114345805
Spliceosome [BR:
dvv03041
]
Complex C
Other components
Step II factors
114345805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_RFWD3
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_NOL10_N
PQQ_2
Beta-prop_WDR19_1st
US22
Motif
Other DBs
NCBI-GeneID:
114345805
NCBI-ProteinID:
XP_050499380
LinkDB
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Position
2:15611034..15625915
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AA seq
573 aa
AA seq
DB search
MLALQQYSGSSDEDDTDNNKNKDTSVDITEIPINSEFSTKNKLAICAAPNVLPTGLDGEK
NHIHPDSGELTYNPKYDILFAPVVGPANPFKTQQQSVERNILSGHIEKAHVSDFQFENQR
RTFTSYGYALDPSISNDGDGHLKVVGSTEEGKNVESVKTVFETSKIRPLDKRKRKRNDNP
GDIEGFLGPWGGFVDEQKVSRPTEEEQAELDEITSKKNKKGKPTEDKPIEEKSVLHIKDP
VDYQGRSFLHAPQDVGVNLKSDTPPEKCFLPKSHIHTWTGHSKGVAAIRWFPRTAHLFLS
ASMDCRIKIWEVYNERRCIRTYYGHRQAVRDINFNNSGKLFLSAGYDRYIKLWDTETGQV
VSRFTSRKIPYCVKFNPDKNKQHLFVAGTSDKKIICWDTRSGDIVQEYDRHLGAVNSITF
VDENRRFVTTSDDKSLRVWEWDIPVDMKYIADPTMHSMPAVTPAPNGKWLACQSMDNKIV
IFSAMNRFKINRKKTFTGHMVAGYACSLDYSPDMSYLVSGDADGKVYVWDWKTTKLYKKW
KAHDNVCISVLWHPHEASKMISAGWDGVIKFWD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttagctctgcaacagtattcgggcagtagtgatgaagatgatacagacaataacaaa
aataaagacacctcagtagatataactgaaatccccattaattccgaattttccactaaa
aataagcttgccatttgtgccgctccaaatgtactgcctacaggtttagatggagaaaaa
aatcatatacatcctgatagtggagaactgacatataatccaaagtatgatatactattt
gctcctgtagtagggcctgcaaatccttttaaaacacaacaacaatctgttgagagaaac
atactctcgggacatattgaaaaggctcatgtaagtgattttcaattcgaaaaccagaga
agaacgtttacgagctatggttacgcattagacccatcgataagtaatgatggagatgga
catctaaaagttgtcggttcaactgaagagggtaaaaacgtagaaagtgttaagactgta
tttgaaacttcaaagataagacccttggataagaggaaaaggaaaagaaatgataatccg
ggtgatatagaaggatttttgggaccatggggtggttttgttgatgaacaaaaagtttct
agaccaacggaggaagaacaggctgagttagatgaaataacttctaaaaagaataagaaa
ggtaaaccaacagaggacaaaccaattgaggaaaagtctgtattgcatatcaaagatcca
gtggactatcaaggaaggtcttttttgcatgctccacaagatgttggggttaatctcaaa
tctgatacacctccagagaaatgttttttacccaagtcccatattcatacatggactggt
cactccaaaggtgttgcagccatcaggtggtttcccagaacggcacatttgttcctgtct
gctagtatggattgtaggattaagatctgggaagtttataatgagagaagatgcattaga
acttactatgggcatagacaagctgtgagagacatcaactttaacaattctggaaagctt
tttctctcagctggatatgacaggtatattaaactttgggacacagaaactggacaagtc
gtatcaagattcactagtcgaaaaattccatattgtgttaaatttaacccagataaaaat
aagcaacatttatttgttgctggtacatccgacaagaaaattatctgctgggatactagg
tctggtgacatcgttcaggaatatgatagacatttgggagctgtcaacagcattactttt
gtagacgaaaaccgaaggtttgttactacctcagatgataagtctttaagggtatgggaa
tgggatatacctgtcgacatgaaatacattgcagatcctacaatgcacagcatgccagcg
gtcacaccagcacctaatgggaagtggttagcgtgtcaaagcatggacaataagatcgtg
atcttttccgccatgaatcgtttcaaaatcaaccgaaagaagacattcaccggtcacatg
gtggcaggttacgcatgctcgttagattattctccagacatgagctatttggtgtccggt
gacgctgatggaaaggtctacgtctgggattggaaaacgacaaaattgtacaaaaaatgg
aaagcccacgataacgtttgtatcagcgtattatggcatccacacgaagcgagtaagatg
atatcggcaggatgggatggcgttattaaattttgggattaa
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