Diabrotica virgifera virgifera (western corn rootworm): 114349455
Help
Entry
114349455 CDS
T09922
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03020
RNA polymerase
dvv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
114349455
09124 Replication and repair
03420 Nucleotide excision repair
114349455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
114349455
03400 DNA repair and recombination proteins [BR:
dvv03400
]
114349455
Enzymes [BR:
dvv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
114349455
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
114349455
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
114349455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
114349455
NCBI-ProteinID:
XP_028155636
UniProt:
A0A6P7H0X3
LinkDB
All DBs
Position
6:complement(7497678..7546313)
Genome browser
AA seq
1897 aa
AA seq
DB search
MATNDSKAPLRTVKRVQFGILSPDEIRRMSVTEGGIRFPETMEAGRPKLCGLMDPRQGVI
DRSSRCQTCAGNMTECPGHFGHIELAKPVFHVGFVTKTIKILRCVCFFCSKLLVSPNNPK
IKEVVMKSKGQPRKRLAFVYDLCKGKNICEGGDEMDVGKESEDPNKKAGHGGCGRYQPNI
RRAGLDLTAEWKHVNEDTQEKKIALSAERVWEILKHITDEECFILGMDPKFARPDWMIVT
VLPVPPLAVRPAVVMHGSARNQDDITHKLADIIKANNELQKNESAGAAAHIITENIKMLQ
FHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVITPDP
NLRIDQVGVPRSIAQNMTFPEIVTPFNFDKMLELVQRGNSQYPGAKYIIRDNGERIDLRF
HPKPSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLSCTSP
YNADFDGDEMNLHVPQSMETRAEVENLHITPRQIITPQANQPVMGIVQDTLTAVRKMTKR
DVFIEKEQMMNILMFLPIWDGKMPRPAILKPKPLWTGKQIFSLIIPGNVNMIRTHSTHPD
DEDDGPYKWISPGDTKVMVEHGELVMGILCKKSLGTSAGSLLHICMLELGHEVCGRFYGN
IQTVINNWLLLEGHSIGIGDTIADPQTYTEIQRAIRKAKEDVIEVIQKAHNMELEPTPGN
TLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIACVGQQ
NVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGLIDTA
VKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGEMVEFQYLATVKL
SNKAFERKFRFDPSNERYLRRVFNEEVIKQLMGSGEVISELEREWEQLQKDREALRQIFP
SGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPLRVIQGVRELLRKCVIVAGEDRLSK
QANENATLLFQCLVRSTLCTKCVSEEFRLSTEAFEWLIGEIETRFQQAQANPGEMVGALA
AQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAAARDA
EKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIPEDQEFVNVYYEMPDFDPTRISPWL
LRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDGKFGE
GADEDVDKMDDDMFLRCIEANMLSDMTLQGIEAISKVYMHLPQTDSKKRIVITETGEFKA
IAEWLLETDGTSMMKVLSERDVDPVRTFSNDICEIFSVLGIEAVRKSVEKEMNAVLSFYG
LYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHAEVDP
MRGVSENIILGQLPRMGTGCFDLLLDAEKCKMGIAIPQAHSSDLMASGMFFGLAATPSSM
SPGGAMTPWNQAATPYVGSIWSPQNLMGSGMTPGGAAFSPSAASDASGMSPAYGGWSPTP
QSPAMSPYMASPHGQSPSYSPSSPAFQPTSPSMTPTSPGYSPSSPGYSPTSLNYSPTSPS
YSPTSQSYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPNYSPTSPSYPSTSPGYSPT
SRSYSPTSPSYSGTSPSYSPTSPSYSPTSPSYSPSSPNYSPTSPNYSPTSPNYSPSSPRY
TPGSPSFSPSSNSYSPTSPQYSPTSPSYSPSSPKYSPTSPNYSPTSPSFSGGSPQYSPTS
PKYSPTSPNYTLSSPQHTPTGSSRYSPSTSSYSPNSPNYSPTSPQYSIHSTKYSPASPTF
TPTSPSFSPASPAYSPQPMYSPSSPNYSPTSPSQDTD
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacgatagtaaagctccgttgaggacagttaaaagagtgcaatttggaata
cttagtccagatgaaattagacgaatgtcagtcacagaagggggcatccgcttcccagaa
accatggaagcaggccgccccaaactatgcggtcttatggaccccagacaaggtgtcata
gacagaagctcaagatgccagacatgtgccggaaatatgacagaatgtcctggacatttc
ggacatatcgagctggcaaaaccagttttccacgtaggattcgtaacaaaaacaataaag
atcttgagatgcgtttgcttcttttgcagtaaattattagtcagtccaaataatccgaaa
attaaagaagttgtaatgaaatcaaagggacagccacgtaaaagattagctttcgtttat
gatctgtgtaaaggtaaaaatatttgtgaaggtggagatgaaatggatgtgggtaaagaa
agcgaagatcccaataaaaaagcaggccatggtggttgtggtcgatatcaaccaaatatc
agacgtgccggtttagatttaacagcagaatggaaacacgtcaatgaagacacacaagaa
aagaaaatcgcactatctgccgaacgtgtctgggaaatcctaaaacatatcacagatgaa
gaatgtttcattcttggtatggatcccaaatttgctagaccagattggatgatagtaacg
gtacttcctgttcctcccctagcagtacgacctgctgtagttatgcacggatctgcaagg
aatcaggatgatatcactcacaaattggccgacattatcaaggcgaataacgaattacag
aagaacgagtctgcaggtgcagccgctcatataatcacagaaaatattaagatgttgcaa
tttcacgtcgccactttagttgacaacgatatgccgggaatgccgagagcaatgcaaaaa
tctggaaaacccctaaaagctatcaaagctcggctgaaaggtaaagaaggaaggattcga
ggtaaccttatgggaaagcgtgtggacttttctgcacgtactgtcatcacaccagatccc
aatttacgtatcgaccaagtaggagtgcctagaagtattgctcaaaacatgacgtttcca
gaaatcgtcacacctttcaattttgacaaaatgttggaattggtacagagaggtaattct
cagtatccaggagctaagtatatcatcagagacaatggagagaggattgatttacgtttc
cacccaaaaccgtcagatttacatttgcagtgtggttataaggtagaaagacacatcaga
gacggcgatctagtaatcttcaaccgtcaaccaaccctccacaagatgagtatgatgggc
cacagagtcaaagtcttaccctggtcgacgttccgtatgaatctctcgtgcacctctccc
tacaacgccgattttgacggcgacgaaatgaacctccatgtgccccaaagtatggaaact
cgagctgaagtcgaaaacctccacatcactcccaggcaaatcattactccgcaagctaac
caacccgtaatgggtattgtacaagatacgttgacagctgttaggaagatgacaaaaagg
gatgtattcatcgagaaggaacaaatgatgaatatattgatgttcttgccaatttgggat
ggtaaaatgccccgtccagccatcctcaaacccaaaccgttgtggacaggaaaacagata
ttttccctgatcattcctggtaatgtaaatatgatacgtacccattctacgcatccagac
gacgaggacgacggtccctataaatggatatcgccaggagatacgaaagttatggtagaa
catggagaattggtcatgggtatattgtgtaagaagagtcttggaacatcagcaggttcc
ctgctgcatatttgtatgttggaattaggacacgaagtgtgtggtagattttatggtaac
attcaaactgtaatcaacaactggttgttgttagaaggtcacagcatcggtattggagac
accattgccgatcctcagacttacacagaaattcagagagccatcaggaaagccaaagaa
gatgtaatagaagtcatccagaaagcccacaacatggaactggaaccgactcccggtaat
acgttgcgtcagactttcgaaaatcaagtaaacagaattctaaacgacgctcgtgacaaa
actggtggttccgctaagaaatctttgactgaatacaataacctaaaggctatggtcgta
tcgggatccaagggatccaacattaatatttcccaggttattgcttgcgtgggtcaacag
aacgtagaaggtaaacgtattccatttggcttcagaaaacgcacgttgccgcacttcatc
aaggacgattacggtcctgaatccagaggtttcgtagaaaattcgtatcttgccggtctc
actccttcggagttctatttccacgctatgggaggtcgtgaaggtcttatcgatactgct
gtaaaaactgccgaaactggttacatccagcgtcgtctgatcaaggctatggagagtgta
atggtacactacgacggcaccgtaagaaattctgtaggacaacttatccagttgagatac
ggcgaggacggactctgtggagagatggtagaatttcaatatttagcaacggtcaaatta
agtaacaaagcgttcgagagaaaattcagatttgatccgagtaatgaaaggtatttgaga
agagttttcaatgaagaagttatcaagcaactgatgggttcaggggaagtcatttccgaa
cttgagagagaatgggaacaactccagaaagacagagaagccttaagacaaatcttccct
agcggagaatccaaagtagtactcccctgtaatttacaacgtatgatctggaacgtacaa
aaaattttccacataaacaaacgagccccgacagacctgtccccgttaagagttatccaa
ggcgttcgagaattactcaggaaatgtgtcatcgtagctggcgaggatcgtctgtccaaa
caagccaacgaaaacgcaacgttactcttccagtgtctagtcagatcgaccctctgcacc
aaatgcgtttctgaagaattcaggctcagcaccgaagccttcgagtggttgataggagaa
atcgagacgaggttccaacaagcccaagccaatcctggagaaatggtgggcgctctggcc
gcgcagtcactgggagaacccgctactcagatgacactgaacactttccattttgctggt
gtatcctcaaagaacgtaaccctgggtgtacctagattaaaggaaattattaatatttcc
aagaaacccaaggctccatctctaaccgtgtttttaactggtgcggctgctagagatgcg
gaaaaagcgaagaatgtgttatgcagacttgaacacaccactcttcgtaaagtaaccgcc
aacaccgccatctattacgatcctgacccacaaaataccgtcattcctgaggatcaggag
ttcgttaacgtctactatgaaatgcccgatttcgatcctacccgtatatcgccgtggttg
cttcgtatcgaactggacagaaagagaatgacagataagaaactaactatggaacaaatt
gctgaaaagatcaacgctgggttcggggacgatttgaattgtattttcaacgacgacaat
gctgaaaagttggtgttgcgtatcagaatcatgaacagcgacgatggaaaattcggagaa
ggtgctgatgaggacgtagacaaaatggatgacgacatgtttttgagatgcattgaagcg
aacatgctcagtgatatgaccttgcaaggtatagaagcgatttccaaggtatacatgcac
ttgccacagactgactcgaaaaaaaggatcgtcatcaccgaaacaggcgaattcaaggcc
atcgcagaatggctattggaaactgacggtaccagcatgatgaaagtactgtcagaaaga
gacgtcgatccggtcagaacgttttctaacgacatttgtgaaatattttcggtacttggt
atcgaggctgtgcgtaagtctgtagagaaggaaatgaacgctgtcctttcgttctacggt
ctgtatgtaaactatcgccatcttgccttgctttgtgacgtaatgacagccaaaggtcac
ttgatggccatcacccgtcacggtatcaacagacaagacactggagctctgatgagatgt
tccttcgaggaaactgtagacgtattgatggacgctgccagtcatgcggaggtcgaccca
atgagaggagtatctgaaaacattatccttggtcaactaccaagaatgggcacaggctgc
ttcgatcttttgctggacgccgaaaaatgtaaaatgggaattgccatacctcaagcgcac
agcagcgatctaatggcttcaggaatgttctttggattagctgctacacccagcagtatg
agtccaggtggtgctatgaccccatggaatcaagcagctacaccatacgttggcagtatc
tggtctccacagaatttaatgggcagtggaatgacaccaggtggtgccgctttctcccca
tcagctgcgtcagatgcatcaggaatgtcaccagcttatggcggttggtcaccgacacca
caatctcctgcaatgtcgccatatatggcttctccacacggccaatcgccttcctacagt
ccatcaagtccagcgttccaacctacttcaccatccatgacgccgacctctcctggatat
tctcccagttctcctggttattcacctaccagtctcaattacagtccaacgagtcctagt
tattcacccacttctcagagctactccccaacctcacctagttactcaccgacttctcca
aattattcacctacttccccaagctacagtccaacatcccctaactattcaccaacatct
cccaactattcacccacttcacctagttatccttcaacttcgccaggttacagccccact
tcccgcagctactcgcccacatctccaagttactcaggaacttcgccctcttattcacca
acttcgccaagttactcccctacttctcctagttattcgccgtcgtctcctaattactct
cccacttctccaaattacagtcccacttctcctaattactcaccgtcctctcctaggtac
acgcccggctctcctagtttttccccaagttcgaacagttactctcccacatctcctcaa
tattctccaacatctccaagttattcgccttcttcgcccaaatattcaccaacttccccc
aattattcgccaacatctccatcattttctggaggaagtccacaatattcacccacatca
ccgaaatactctccaacctcgcccaattacactctgtcgagtccgcagcacactccaaca
ggtagcagtcgatattcaccgtcaacttcgagttattctcctaattcgcccaattattca
ccgacgtctccacaatactccatccacagtacaaaatattcccctgcaagtcctacattc
acacccaccagtcctagtttctctcccgcttcacccgcatattcgcctcaacctatgtat
tcaccttcttctcctaattattctcccactagtcccagtcaagacactgactaa
DBGET
integrated database retrieval system
