Diabrotica virgifera virgifera (western corn rootworm): 126878485
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Entry
126878485 CDS
T09922
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126878485
03041 Spliceosome [BR:
dvv03041
]
126878485
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126878485
Spliceosome [BR:
dvv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
126878485
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
DUF4523
RRM_3
RRM_7
RRM_Nup35
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
126878485
NCBI-ProteinID:
XP_050497194
LinkDB
All DBs
Position
10:46606664..46990082
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AA seq
237 aa
AA seq
DB search
MNGQWLGSRSIRTNWATRKPPAPKSEVNSKPLTFDEVYNQSSPTNCTVYCGGITNGLTEE
LMQKTFAPFGTIQEIRVFKEKGYAFVRFSTKESATHAIVAVHNTDINGQIVKCSWGKESG
DPNNAPVTGQAIAGTSFPYSAYGQQLSYWYPQSYPTASSAQIQGQFLGGMQGYAYGQFGG
YQQSYMGMGLQVPTAATAWQGIPSQPQIPATPQQMTAPTASLQQPGIVFPIQQYQAQ
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtcaatggttaggtagcaggagtatcagaaccaactgggcaacacggaaacca
ccagcaccaaaaagcgaagtaaactccaaaccactgacctttgatgaagtttacaaccaa
agcagtccaacaaattgtacagtatattgcgggggtataacaaacggtctgacagaggaa
ctgatgcaaaagactttcgctccatttggaactattcaagaaattagagtatttaaagaa
aaaggatatgcctttgtaagattttctacgaaagaatccgccacgcatgctatagtagca
gttcataatacagacatcaatggtcaaattgtcaaatgttcttggggaaaagaatccgga
gatcccaataatgcacccgtcactggtcaggcaatcgcaggtacgagttttccctatagt
gcctacgggcagcagttaagttactggtatcctcaaagttatccaaccgcaagctctgca
caaatacagggacagtttctaggaggaatgcaaggatatgcttatggccaatttggggga
tatcagcagtcgtatatgggtatggggctccaagtacctactgcagcaacagcctggcaa
ggtattccaagccagccacagataccagctacaccccaacagatgacagcccctacggct
tcactgcaacagccagggatagtgttccccatacaacaatatcaagcacaatga
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