Diabrotica virgifera virgifera (western corn rootworm): 126879221
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Entry
126879221 CDS
T09922
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03013
Nucleocytoplasmic transport
dvv03015
mRNA surveillance pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126879221
09122 Translation
03013 Nucleocytoplasmic transport
126879221
03015 mRNA surveillance pathway
126879221
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126879221
03041 Spliceosome [BR:
dvv03041
]
126879221
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
126879221
Spliceosome [BR:
dvv03041
]
Common components
Common spliceosomal components
Cap binding complex
126879221
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
DUF4611
RRF
Motif
Other DBs
NCBI-GeneID:
126879221
NCBI-ProteinID:
XP_050498235
LinkDB
All DBs
Position
1:308545478..308630044
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AA seq
793 aa
AA seq
DB search
MSRRRAHDDDDGYERAYRKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLE
ADLSTFRAKILRILTDCAIRMPEKCTIYTTLVGLLNAKNYNFGGEFVEYMVKSFKESLKQ
CKWDAARYALRFLADLVNCHVISNTSLLQLLNNMIDTANEDNVPQVRRDWYVFAILSTLP
WVGRELYEKKEKSLYDLMTQIEVFLNKRSKKHHKALRVWAIDSPHPQEEYLDCLWAQVRK
LKQDNWAEKHIPRPYLAFDSILCEALQHNLPSIIPPPHHETYEYPMPWVVFRLFDYTDCP
EVPILPGAQTIERFLIEEHLHSIIELYHLERKDCAAHLLNFPYKLKIPLEYCIVEVIFGE
LFHMPKPRYIEIAYGAILIELCKLQPSTMPQVLAQATEMLFNRIDTMNVSCFDRFVNWFS
YHLSNFQFRWSWEDWDSCLTLDDEHPKPKFIRETMLKCMRLSYYQRIREILPESFSKFIP
EKTEPDYKHAKEGASSLPGTEAAHKLVVTIRQKCSPEEALAVLKDLPNPRSEEDADGRFN
PLKIDVFVQTLLNLGSKSFSHSFAAISKFHYVFKILAESEEAQICILRNMFELWHNHQQM
MIVLVDKMLKTQIVECSAVANWIFSKEMNSEFTKMYLWEILHLTIKKMNKHVIKIGGELV
EAREKLARAESSDSESDDDEKKKQDDLEKPTEEMIEKMEEKLEGAQGDQKNLFLIIFQRF
IMILTEHLVRCDTDGKDYGTHWYKWTIGRLQQIFLAHHEQVQKYSSTLETLLFTQDLDNH
ILEVFQQFVSLRA
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacgaagggctcatgatgatgatgatggatacgagagagcatacagaaagcgg
cgtcgtgtctcagaaaaccaagagattgaagacagattggaatctcttattctcagagta
ggcgaaaagagtacgtcgtccctagaaagtaatttggaaggcttagctagtgttttggaa
gcagatctttcaacttttagggccaagattttaaggatcctcacagattgcgctattcga
atgcctgagaaatgtaccatttatacaacattagtagggttattgaacgctaagaattac
aattttggtggagaatttgtagagtatatggtaaagagtttcaaggaatctttaaaacaa
tgcaaatgggatgctgccagatatgcactccgatttttagcagatttggtaaactgtcac
gtcatttcaaatacttcgcttctgcagctactaaacaatatgatagatacagcaaatgaa
gataacgtaccacaggttcgtagagattggtacgtttttgccatacttagtacactccca
tgggttggacgagaattgtatgaaaagaaagagaagtcattatatgacctgatgactcaa
attgaagtatttctaaacaaaagatcaaagaagcaccacaaagccttaagagtttgggca
atagatagcccccatccacaagaagagtatctagattgcctctgggcacaagtacggaag
ttgaagcaggataattgggctgaaaaacatattcctaggccatatttagcttttgattct
atcttgtgtgaagccttacagcataatctaccttctataatacctccacctcatcacgaa
acttatgagtaccctatgccttgggttgtatttaggttatttgactacacagactgtcca
gaagtgcccattttaccaggagcccaaactattgaaagatttctcattgaagagcatctt
cattcaatcattgaactgtaccacctggaaaggaaagattgtgctgctcacctgttgaat
ttcccttataagttaaaaattcccttggaatactgtatcgtagaagtcatttttggagaa
ttgtttcacatgcccaagccaagatacattgaaatcgcctatggtgctattttaatcgaa
ttgtgtaaactacaaccctctaccatgcctcaagtacttgcacaagctactgagatgcta
ttcaaccgaatagatactatgaacgtttcttgcttcgatagattcgttaactggttctct
tatcacttgagcaacttccagttcagatggtcttgggaggactgggattcctgtttgact
ttggatgatgagcatcccaagcctaagtttattagagaaactatgttgaaatgtatgagg
ctatcttattaccagcgaattcgggaaattctacccgagagttttagcaaatttatccca
gaaaaaaccgaacccgattataaacacgccaaagaaggagcttctagtttacctggtacc
gaagctgcccacaagttagtagttaccatccgacaaaaatgtagccccgaagaagccctt
gccgtactaaaagacttacccaacccgcgatcagaagaagacgccgatggtagattcaac
ccacttaaaatcgacgttttcgtacaaactttattgaacttaggctcgaagagtttctct
cacagcttcgcagctatttcaaagtttcattatgtgttcaagattttggctgagtcagaa
gaggctcagatttgtatactgaggaatatgttcgagttgtggcacaatcaccagcagatg
atgattgttttggtggacaagatgctgaagacacagattgttgagtgctcagcggtggct
aactggattttttccaaagaaatgaattcggagttcacgaaaatgtatttgtgggaaatc
cttcatcttaccattaagaaaatgaacaagcacgttatcaaaataggaggtgagctggtg
gaagctagagaaaaattggcgcgtgcagaatctagtgacagtgagtcggatgatgacgag
aagaaaaaacaagatgaccttgagaaaccaacggaggaaatgatagaaaaaatggaggaa
aaactggaaggggctcaaggagatcagaagaatttgttcttgatcatcttccaacggttt
atcatgatcctgactgagcatttggtaagatgcgacacagacggtaaagattacggtacg
cactggtacaagtggacgattggaagattgcaacaaatctttttggcgcaccacgagcaa
gtgcagaaatacagttcgacgttggagacgctattgttcacccaagacctggacaaccac
atccttgaagtattccaacagtttgtgtcgttgagggcctaa
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