Diabrotica virgifera virgifera (western corn rootworm): 126880612
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Entry
126880612 CDS
T09922
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126880612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126880612
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126880612
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
126880612
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
126880612
NCBI-ProteinID:
XP_050500834
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Position
1:872869..908299
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AA seq
296 aa
AA seq
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MPQKIQIRLATHRVNPSVAPNKRYPKIFTPGEVITAQDEFMRGHGTYEENGELKASVAGV
REQVNNLISVRPLKSRYNGEIGDVVVGRITEVQQKRWKVDTNSRLDSALLLSSVNLPGGE
LRRRSVEDEHMMRQFLQEGDLISAEVQNVFSDGALSLHTRSLRYGKLGQGVLVKVFPSLI
KRSKTHFHTLPIGASIILGNNGFIWISPIIVNSEDSVGGFIQNLEEVIPRQEREIIGRLR
NCVLALTQSKMMLYDTSILYAYEESLKYSVAELLIPEAMVDVAFLTQHRLSMLEIE
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaaaattcagatacgtctcgctactcacagagtaaatccatcagttgcccca
aataaaaggtatccaaagatatttactccaggagaagttatcactgctcaagatgaattc
atgagaggtcatggaacatatgaagagaatggagaactgaaagcttcagtagcaggtgta
agagaacaagttaataatctgatatcagtaagacctctaaaaagtagatataatggagaa
ataggtgatgttgtagtaggacggattacagaggttcagcaaaaaaggtggaaagtagat
accaattcaagactggactcggcactgctcttatcttcagtaaatttgccaggtggtgaa
ttgaggagaagatcagtggaggatgaacacatgatgaggcagtttttacaagaaggtgat
cttataagcgcagaagtacaaaatgtattttcagatggagctttgtctttacatacaaga
agtttgagatatggaaagcttggacaaggtgttttggtaaaggtatttccatctttgatc
aagagaagcaaaacacattttcacactctacccataggagcaagcatcatattgggaaac
aatgggttcatctggatatctccaattattgttaattctgaagatagcgtcggaggcttc
atacaaaatttggaagaggtaattccaaggcaagagagagaaataataggacgtttaaga
aactgtgtcttggcgttaacacaaagcaaaatgatgttgtatgataccagcattttatat
gcttacgaagaatccttgaaatattctgtagccgaactactcatcccagaagcgatggta
gatgtcgcttttttaacacaacataggctgtcgatgctggaaattgaatag
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