Diabrotica virgifera virgifera (western corn rootworm): 126880657
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Entry
126880657 CDS
T09922
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126880657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126880657
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
126880657
U7-dependent histone pre-mRNA processing factors
126880657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
RRM_Rrp7
DUF908
Motif
Other DBs
NCBI-GeneID:
126880657
NCBI-ProteinID:
XP_050500666
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All DBs
Position
2:complement(280326284..280352593)
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AA seq
431 aa
AA seq
DB search
MDNLETNIMDKSMRSVFVGNIPYEATEEKLKDIFGEVGQVLSFKLVFDRETGKPKGYGFC
EYRDQETALSAMRNLNGYEIGGRNLRVDNACTEKSRMEMQNLLNQPPVENPYGEAVQAEK
APEAISKAVASLPPEQMFELMKQMKTTIQNNPTEARQMLLQNPQLAYALLQAQVVMKIID
AATAVSLLHPVNQVPATLMPGDKNVPVQVPVNNQYREPPAPVQPPVHPRQDFQPVPPPVM
HPSQNQVFPSQDIDLRSIGGVPDLRNLRPMGDQDMRQMPSAIQNPLPPTIGESILKQGDM
KGDSFIRDPRAAQAFAGDPRQARMDPRQKPMVPPPQSQMPIPPPIARPPVMPPQPQVPVT
RAAPPPQPSPAPTPATASPNVANAGASDQEKAALIMQVLQLSDEQISMLPPEQRNSILVL
KEQIAKSAHTR
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggacaacttagaaaccaatattatggataagtcgatgagatcagtcttcgtggggaat
attccatatgaagcaactgaggaaaaattgaaagatatatttggcgaagttggacaagta
ctatcttttaagctcgtgtttgatcgtgaaactggaaaacccaagggatatggtttctgt
gaatatagagatcaagaaaccgccttgagcgcaatgaggaatttaaacggttacgaaata
ggcggaagaaatttaagagtggacaatgcttgtactgaaaaatctagaatggaaatgcaa
aatctcctcaaccaacctccagtagagaatccctatggagaggcagttcaagctgaaaaa
gctcctgaggctataagtaaggctgttgcatctctacctcctgaacaaatgtttgaattg
atgaagcaaatgaagacaactattcagaataatccaacagaagcaaggcagatgctttta
cagaatccgcagcttgcctatgctcttttacaagctcaagttgtaatgaaaattattgac
gcagctactgcagttagtttacttcatcccgtgaaccaagtgccagcgacacttatgcct
ggagacaagaatgttcctgtccaagtaccagttaataatcagtacagggagcctccagca
cctgttcaaccgcctgtccatccaagacaagacttccaacctgttcctcctcctgttatg
catccatctcaaaatcaagtatttccaagtcaagatatagatctgagatccattggtggt
gtgccagatctaagaaacctaagacccatgggtgaccaggatatgagacaaatgccatct
gctattcaaaatcccttaccaccaactatcggagaaagtattcttaaacaaggagatatg
aagggtgatagctttattcgagatcctagagcagcgcaggcgtttgcaggagatccaaga
caagcacgcatggatccacgtcagaaacccatggtgcctcctcctcaaagccaaatgccc
ataccacctccaatcgcaagaccacctgtaatgccgcctcagcctcaagttcctgtgacg
agagcagcacctccacctcaaccgtctccagctcctactcctgcaacggccagtccaaat
gttgcaaatgctggggcttcggatcaagaaaaggccgcactcattatgcaagtattgcag
ctgtcagatgaacagatctctatgcttccgcctgaacagaggaatagtattttggtatta
aaggaacaaattgcaaaaagtgcacacacacgttaa
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