Diabrotica virgifera virgifera (western corn rootworm): 126881206
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Entry
126881206 CDS
T09922
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126881206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvv03021
]
126881206
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126881206
Transcription machinery [BR:
dvv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126881206
RNA polymerase I system
126881206
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
126881206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW6_SPT5
Spt5-NGN
KOW7_SPT5
KOW
KOW5_SPT5
KOW2_Spt5
KOWx_SPT5
Spt5_N
KOW1_SPT5
CTD
GPKOW_C
DUF3912
DarP
Motif
Other DBs
NCBI-GeneID:
126881206
NCBI-ProteinID:
XP_050501266
LinkDB
All DBs
Position
3:complement(94806120..94909556)
Genome browser
AA seq
1118 aa
AA seq
DB search
MSDSEGSNFSDNENASAAGSVRSRSSRGSVRSRSRSPSRSRSRSMSKSRSRSPSRGSRMS
RSRSRSPSRSRSRSPSRSRSRSRSRSKSRSRSRSRSRSARSGSEAKEASGPEDVVEEEEP
DGDSLRSDEYDSEEDESDDGGRAKKRKKNKDRYGGFIIDEAEVDDEVEDEDEWEDGAQEI
GIVPNEVDEFGPTAREIEGRRRGTNLWDAQKESEIEEYLKRKYADDGAAIKHFGDGGEEM
SDEITQQTLLPGVKDPNLWMVKCRIGEEKSTCLLLMRKFLAYQNTNEPLQIKSVVAPEGV
KGYIYIEAYKQPHVKAAIQNVGNLRMGIWKQQMVPIKEMTDVLRVVKEQTGLKSKQWVRL
KRGLYKDDIAQVDYFDMAQNQVHLKILPRIDYTRLRGALRTAQTESEAEKRKKKRRPPSK
PFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTLSAVIIDGVKPTLAELERFEE
QPEGIDLELSVDKEEKAVTHSFSAGDNVEVCEGELIYLQGKIISIDGHMITVMPKHEDLK
EALVFQAYELKKYFKTGDHVKVLAGRYEGDTGLVVRVENNRVVLISDLTMHEMEILPKDL
QLCTDMASGVDSLGKFEWGDLVNLDAETVGVIIRLERENFHVLNMHGKVVECRPGSLQKR
RIHKYTAALDSYRNNLHRRDMVKVIDGPHSGFSGEIKHLYRNFAFLYSVEFLQNGGIFVC
KTKHLQLAGGNKNMPSADIGIGMEFMSPRRSSPMHPSSGGGAAGAAFGAFGAGRPAGGAG
RGRGSRDRDLIGTTIKIIRGPYKGNIGIVKDVTQSSVRIELHTSCQTISVDKNHINDVGA
PSGRDGSASSYGKTPAYAGNQTPLYRDSGNKTPMCDSGSRTPLHYGSMTPIHDGSRTPNA
SSEWDPAVSGNTYPSPGYTPSTPGYQANGPYTPQTPGTMYDGSYSPYQASPGYQSAISTP
SPGTGYGQSPASSNNPYSTPSSGYSPNMPYNPQTPGAGLDVLPMTDWHTVDIEVRIRDSH
DDPGLVGQTGVIRSISAAMCTVFLPEEDRVVNIICDHLDPVRPQRGDQFKVIIGEEREQT
GELLSIDANEGVVKIKDDITMLPLQNLCKMRPSGQKNM
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattcggagggtagcaacttttcggataacgaaaatgcgtctgcagcggggtcg
gtaaggtcccgcagctcaagaggtagcgttcgaagtagatctagatccccgtctagatcc
aggtcgagatccatgtcgaaaagtagatcgagatcaccatcaagaggctcaagaatgtcc
agatccagatcacggtctccctctcgttcaagatcaagatcaccttctagatctcggtct
cgttcacgctcccgatcgaaatctagatcacgaagcaggtccaggagcagatcggcaaga
tctggatcagaagcaaaagaagcttcaggtcctgaggatgttgtggaggaagaagaacca
gatggagatagtctaaggtcagacgaatatgacagtgaagaagatgaaagtgatgatggg
ggtagagcaaagaaaaggaaaaagaataaagacagatatggcggatttattattgacgaa
gctgaggtagatgacgaagttgaagatgaagatgaatgggaagatggagcacaagaaatt
ggaattgttcctaacgaagttgacgagtttggacctacagcaagagaaattgaaggaaga
agaagaggaacaaatttatgggatgctcagaaggaatcagaaattgaggaatacctaaaa
agaaaatatgctgatgatggagcagcaatcaaacattttggagatggcggtgaagaaatg
tcagatgaaatcacacaacaaacattattgccaggtgttaaagatcccaacttgtggatg
gtcaagtgtagaattggagaggaaaaatctacttgcctcttacttatgcgaaagtttttg
gcttaccaaaataccaatgaacctttgcaaatcaagtcagtagtagcacctgaaggtgtt
aaaggatacatatatattgaagcctacaaacaacctcatgtcaaggctgctatccagaat
gtgggaaatttaagaatgggtatctggaaacagcagatggttcccatcaaggaaatgacg
gatgttttaagagttgtgaaagaacaaactggtttgaaatcaaaacagtgggtaaggctt
aagcgaggtctttacaaagatgacattgcccaagtcgattattttgatatggcacaaaat
caggtacatcttaaaattttaccaagaattgactacacacgtttgagaggagccctaaga
acagcacaaacagaatctgaagcagaaaagcgcaagaaaaaacgccgccctcccagtaaa
cctttcgatcctgaagctatcagagccataggtggtgaagttacgtccgatggtgacttt
ttaatctttgaaggtaatcgttactcacgcaagggctttctatacaaaaattttaccctc
agcgccgttataattgatggtgttaagccgaccttggcagaactggaaaggttcgaagaa
caacctgaaggaatcgatttggaattgtccgtggataaagaggagaaagctgttactcat
tcattcagcgcgggagataacgttgaagtttgtgaaggtgaattgatctatttgcagggt
aaaatcatcagcatcgatggacacatgataaccgtaatgcccaaacacgaggatttgaaa
gaggcattggtgtttcaagcttatgaattgaagaagtatttcaaaactggagatcatgta
aaagttttggcagggcgctatgaaggagacactggtttggtagtcagagtagaaaataac
agagtcgtattgatatctgacctgactatgcacgaaatggaaattctaccaaaagactta
caattatgtactgatatggctagtggtgtcgattcactaggtaaattcgaatggggtgat
cttgtaaacctggatgctgaaactgttggagttattattaggttggaaagggaaaatttc
catgttttgaatatgcacggcaaagttgttgaatgcaggcctggatcgttacagaagaga
aggatccataaatacactgcagccttggattcataccgaaacaatttacatagaagagat
atggtcaaagtaatcgatgggccacattctggattttctggagaaattaaacatctctat
agaaatttcgcatttctctactcagtggaatttttgcaaaatggtggtatatttgtgtgc
aaaactaagcatcttcagttggctggaggcaacaagaacatgccttctgcagatattggc
attggaatggagtttatgtccccgagaagaagttctccaatgcatccatcaagtggtgga
ggtgcagccggagcagctttcggtgcctttggagctggtagacctgctggtggagccggt
agaggaagagggagcagagatagagatcttatcggtacaaccatcaaaattattagaggg
ccttataagggcaatattggtatagtaaaagatgttactcaaagttcagtcaggatagag
ttgcatacatcttgtcaaactatatctgtggataagaaccacattaatgatgtcggagct
ccaagcggtagagatggcagcgcttccagttatggcaaaactccagcatacgcgggtaac
cagactcctttgtacagagattctggcaacaaaactcccatgtgcgattctgggtctcgt
acccccttgcattatggttcaatgactccgattcacgacggttctaggacaccaaatgct
agttcagaatgggatcctgcggtctctggtaatacttatccatcaccaggatatactcct
agtactccaggctatcaagccaacggtccatatacgcctcaaacacctggtacaatgtac
gatggcagctacagtccatatcaggcgagtcctggatatcaaagcgccatttccactccc
agtcccggaaccggatacggccagtctcctgcttctagcaacaatccgtacagcactccc
agttctgggtatagcccgaacatgccgtacaatcctcaaactcccggtgcaggtctggat
gtgctacctatgactgattggcataccgtcgatattgaggtaagaattcgcgatagtcat
gatgatcctggcttagttggtcaaactggcgttattagaagcatatctgcagctatgtgt
acagttttccttcctgaagaagatagagttgttaacatcatatgcgatcatctagatcca
gtacggccacaaagaggagatcagtttaaggtaattattggggaagaacgagagcaaact
ggcgaacttctttctatagatgcaaacgaaggagtagttaaaattaaggacgatattact
atgctgcccttacaaaatttatgcaagatgaggccctcaggtcaaaaaaatatgtaa
DBGET
integrated database retrieval system
