Diabrotica virgifera virgifera (western corn rootworm): 126881331
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Entry
126881331 CDS
T09922
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126881331
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dvv02000
]
126881331
Transporters [BR:
dvv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
126881331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
AAA_30
AAA_15
TsaE
Motif
Other DBs
NCBI-GeneID:
126881331
NCBI-ProteinID:
XP_050501508
LinkDB
All DBs
Position
3:138655403..138909882
Genome browser
AA seq
1720 aa
AA seq
DB search
MGEEVTEKTRIQPKNMAELKHSLYLSQLRAMLKRNLLLKKREKRKTTAEVLLPLYSLAIL
IVIKITMPNPNLPAIDTPRGEEELLHHFGKVESHTIAVVPNTSEVVYFLEQIDNLWSSIS
YMNLSKINWVLYASEKDLMSEYWHRPKYIPIAVLFDNQDPLDGPLKYEIRTNPSIIGTPP
TSILYSSPLACRDTNNKWYSYARVIPAMEGGDSCPVNQYYFSGFLALQALIDYTRIRIDT
NADLKVPQLLLEMFPKPAHTGNWMFLIRIIIPIYMVMALSQFIAYLLILIVGEKEKKIKE
GMKIMGLKDSVFWLSWFIIYGVFVLFLSVVCVVLLYSLKVFIHTNFLLIFILIVLYCFSI
IMFGFMITPFFDKSRTAGILSNFVVIIMSMFYFVQVFLKDSNPIALWFMSLISPSGFALA
IDNAIVMDLSGEGVNISNIWSGRGVPFGGSLIMMAVDIVVYGLLAYYLDSVIPSEYGIKR
PPLFCFKLSFWFPKKTLQKIPLANGESSEHSLNNTDYTLDVEPVPREMRGREAIKIVDLY
KTFQHCQKPEIKAVNGINLTIYEGHITAILGHNGAGKTTLFNILTGLTAPSAGTAYIFGH
DVRDPNDMDAIRRMTGVCPQHDILFDNLSPREHLEFFAAVKGIHPSLIEFEVMKTLRDID
LTDKANSSSKHLSGGQKRKLSIGIAIIGDPKIVILDEPTAGVDPYSRRHMWSVLQNKRHG
RVILLTTHFMDEADILADRKAVVSKGNIRCCGSSLFLKNKFGIGYHLTLVLEGHSKENAI
NKLVITHVPKAEKARRHGRELSFILPHNAVSNFASLFSAIEQEINNKSSKLGISSYGVSM
TTLEEVFLHLERDEETEEDTVDNLSKKIVRNRALSRSLSLQNKSTSYQSLQNESNNALIQ
DAKAAGDFETCESPIKGIGLDSIECHPNWFQTLIALLRLRILRLRRDIKKLYVMIFLPLG
LAVLGLFVNSMETGQLRTKSLVLNLTTYPSMPIAVHNGSDANVDDFLIQLLDLGVDVLDD
YDGNFSSLLNIAPHMVAFNVNRFDYPDYSVTVLYNDTEQHSLPIAVNLINNALYRLLTGE
MEISEKWNPIQVRSQPFQQTSSDFSLGMGTATFTMGMIFALIPVTLATDMVYDREIKAKN
QLRVNGLSFSLYFISYFIVLAVIMAFICSVLLLLVLLFKTPSLSSWPALTTIGILILFYC
PSSILFSTCVSYIFDKTDSAQSIMSNVATFLGWIPFLLVMILGGNVALILHIVCSLLNTM
YLPYAIIYFVQRVDLACKSNFGCTELTLKNYMTIEIVVMFVGLILHIPFWFFILLIVDIK
KNGGKARDIFKFRKKVVDDFTEDANEASDIGENEDQDVKAERQKVKNLMHNHIINPPVVM
VENLHKEYIKSELRCTCCKSEEESETTKIAVKSLSLAVDAGEVFGLLGHNGAGKTTTMKI
ITAEEAPTRGRVQIAGNSITSNMNSAFQLLGYCPQHDALWKNITVREHLEVYASIRGVPY
QSISRLVNSYLSGLQIHEHADKQTHQCSGGTRRKLSFAMAMVGNPKVVLLDEPSTGMDPR
SKRFLWDTVLASFQGSKGAILTTHSMEEADALCSRVGIMVKGELRCLGSTQHLKNLYGAG
YTLEMKLGGGDMTPTSDSGDRHDELREFISSLFPDAALQEIFADRLVFSVPQQSVPSLAN
CFKQLEKAKTELDIEEYSFSQTTLEQVFLKFAHESENDES
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggaggtaactgagaagacccgcattcagccaaaaaatatggctgaactcaaa
cattcgttatatctctcacagctgagagctatgctgaagaggaatttactgctgaagaaa
agagaaaagcgaaaaacaacagcggaagtacttttacctttatactctttggctatatta
atcgtcatcaaaattacaatgccaaatcccaatctaccagcaatcgataccccccgtgga
gaagaagaacttttacaccattttggaaaagtagaatctcataccatagctgtagtaccg
aatacatcggaagtagtgtactttttagaacaaatagacaacctatggagctcgatcagt
tacatgaatctctcaaaaataaactgggttctttatgctagtgaaaaggatctcatgtct
gaatattggcatagacccaagtacattccaatagcagtcttatttgataatcaagatcca
ttggatggtccacttaagtatgagatccgaacaaatccttccataattggaacaccacca
acttcaatattgtacagttctccgttagcgtgtcgagatactaacaacaaatggtacagt
tatgctagagttataccagcaatggaaggtggcgatagttgtcctgtgaatcagtattat
ttctctggatttttagcccttcaggcacttattgattacacaaggataagaatcgacaca
aacgcagaccttaaagtgcctcaattactgttagaaatgtttcctaagccagcgcatacc
ggcaactggatgtttctcatccgcataatcattcctatttacatggtcatggctttatcc
caattcatagcttaccttttgatccttatagtaggtgagaaggaaaagaaaatcaaagaa
gggatgaagataatgggattgaaggattcagttttttggttatcatggtttataatatac
ggagtttttgtactatttttgtcagtcgtctgtgtagtgcttttgtatagtctaaaagta
tttatacatacaaattttctactgatatttattttgattgtactctactgtttttcgatt
ataatgtttggattcatgataacgccatttttcgataaatcgaggactgccggaatactg
agcaattttgtagtaataataatgagcatgttttattttgtacaagtgtttttgaaagat
tcaaatccaatcgctttatggtttatgtctttaataagtccatcaggatttgcccttgcc
atcgacaatgctatagttatggatttgtctggagaaggagtaaatataagtaatatctgg
tcaggtcgcggtgttccttttggaggtagtctaataatgatggcagtcgatattgtagtt
tatggtttattagcatattatttagacagtgttatacctagtgaatatggtataaaacgt
cctccattattttgttttaaactgtcattttggtttcctaagaagactcttcaaaagatt
ccccttgcaaacggagaaagttcagaacattcattaaataatacggactataccttagac
gttgagccggttcccagagaaatgcgtgggagggaagcaattaaaattgtggatctttat
aaaacatttcagcattgtcaaaaacccgaaatcaaggctgtgaacggaatcaatctcacg
atatacgaagggcacataacagctattttaggtcataacggcgcaggaaaaactacttta
tttaatattttaactggtttgacagctccttctgctggcaccgcatatatttttggacat
gatgtcagagatcccaacgacatggacgcaattagacgaatgacaggcgtttgccctcag
catgatatcttattcgataatctgtcaccacgagaacatttagaatttttcgcagctgta
aaaggaatccacccgtcgttgatagaatttgaggttatgaaaacactccgcgatatcgat
ttaacggataaggcgaattcttcaagtaaacatttaagtggaggacaaaaaagaaaactg
tctatcggaattgctattataggggaccctaaaattgttatattggatgaaccaacagct
ggtgtagacccttattcacgaaggcatatgtggtcagttttgcaaaataaacgacatggt
agggttattttattgacaacgcattttatggacgaagcagatattctagctgataggaaa
gcagtagtgtcgaaaggcaacatacggtgctgcggaagttctttgttcttaaaaaacaaa
ttcggaattggttatcatctgacacttgtattggagggacattctaaggaaaacgcaatc
aacaaactagtaataacgcacgtgcctaaagcagaaaaagctcgaagacatggaagagaa
ttaagctttatactacctcataatgccgtatcgaattttgcgtctttattttcagcgata
gagcaagaaattaataataaaagtagcaaattaggaatttctagttacggtgtctcgatg
acgacattggaagaagtatttcttcatttggaaagagacgaagaaacggaagaagatacc
gtagacaatctgtcgaagaaaatagtgaggaacagagccctaagtaggagccttagttta
caaaataagagtacgagttatcagtctttacaaaatgaaagtaacaatgctctcattcaa
gatgccaaagctgcgggtgattttgaaacctgtgagtctcctatcaaaggcataggtttg
gactccatagaatgccatccaaattggttccaaacattgatagctttgttgaggttaagg
attcttagattgcggcgggatatcaagaaattatacgttatgatatttctacctttaggt
ttagctgttctaggattatttgttaatagcatggaaacgggtcaattgcgaacaaagtcg
ttggtcctgaacctaacaacttatccttcaatgccaatagctgtacataacggatccgat
gccaatgtggatgattttctaattcaattactagatttaggagttgacgtattagacgac
tacgatggaaatttttcatctttgttaaatatagcgcctcatatggtggcctttaatgtg
aatagatttgattatccggattatagtgtgacagtactctacaatgacaccgagcagcac
agcttgcctatagctgttaatttaatcaacaatgccctctacagactcttaactggtgaa
atggaaatcagtgagaaatggaatcctatccaagtaagaagtcagccttttcaacaaaca
tcaagtgactttagtctgggaatgggtactgccacgtttactatgggaatgatttttgcc
cttataccagttactttggcgactgacatggtgtatgatagagagataaaagcaaaaaat
caactacgagtaaatggcctatcattttctttatactttataagctattttatcgtgctg
gcagtcataatggcttttatttgttcggtactactgttgcttgtactactatttaaaaca
ccgtcattatcttcgtggcctgcactaactacaataggaatactaattctgttttactgt
ccatcgtccatcctgttcagtacttgcgttagttatatatttgataaaacagattcagcg
cagtcaattatgtcaaatgtagcgacttttcttggatggattccttttttgttggttatg
atactaggtggaaatgtagctctaatacttcatatagtctgttctctcctaaacaccatg
tatcttccttacgcaatcatctattttgtacaaagagttgatttggcttgcaagagcaat
ttcggttgtacagaacttacattaaaaaattacatgacaatagaaatagtcgttatgttt
gtgggattaattttacatattccgttttggttctttatacttcttatagtggatattaag
aagaatggaggaaaagcgagagatatatttaagtttcgaaagaaagttgtggatgatttc
acggaagatgccaatgaagccagcgatattggtgaaaatgaagaccaagatgttaaagct
gaaagacaaaaagtgaaaaatctaatgcacaatcacattataaacccaccagtcgttatg
gtagagaatttacataaagagtatattaaaagcgaactcagatgtacatgctgtaaatca
gaagaagaatctgagacaacgaaaatagcagttaagtctctttccctagccgtagatgcc
ggtgaagtcttcggccttttaggtcacaatggtgctggaaaaaccaccacaatgaagata
attacagccgaagaagctccgactagggggcgagttcaaatagcaggaaacagtataaca
tcaaatatgaattctgcatttcaactgctgggctattgtccacaacatgatgctttgtgg
aaaaacattactgttagagaacacttagaagtttatgcttccataaggggtgtgccttat
caatccatttcacgtctagtcaattcgtatttgagtggacttcaaatccacgaacacgca
gataagcagactcatcagtgttcaggtggtacgagaagaaaacttagttttgccatggcc
atggtcggcaatccaaaagtagtacttttagacgaaccaagtacgggtatggaccccagg
agtaagaggttcttgtgggatactgtgttagccagttttcagggttcaaaaggagctatt
ttaaccacacattccatggaagaagccgatgcattatgttctagggtaggaattatggtc
aagggagaattaaggtgtcttggttcaactcaacacctgaaaaatttatatggtgctgga
tacacgttggaaatgaagttgggcggtggagatatgacaccaacatcagactcaggtgat
agacacgatgaacttcgggagtttatatcatctctatttcccgacgcagctcttcaagaa
atcttcgccgatagacttgtgtttagtgttccccaacaaagtgttccatctttagctaat
tgttttaaacaattagaaaaagctaagacggagttggacattgaagaatacagtttcagt
cagactacactagagcaagtgttcttgaaattcgcccatgaaagcgaaaatgatgaatcg
tag
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integrated database retrieval system
