Diabrotica virgifera virgifera (western corn rootworm): 126883913
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Entry
126883913 CDS
T09922
Name
(RefSeq) collagen alpha-5(IV) chain-like isoform X1
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
126883913
NCBI-ProteinID:
XP_050505582
UniProt:
A0ABM5K5W5
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Position
4
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AA seq
2646 aa
AA seq
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MNKRLVLVLSILFSFFLKASSAQCSNEAKPAPHPTDCTKFYLCPGNFEMSCGPGTHFNPN
ILACDWPSRADCKSGGPPGEPPVDASLAPCSNENKPSPHPTDCTKFYLCPGNFEMSCGPG
THFNPKILVCDWPHQAGCKVTVPGKPTGAHKKPPGSLQSPPREPTGQLLGPPGKIFGSPD
TPPDQPPGSPEKPPRPPAGLHKKPTEQQQGPNTKPPGSLIKPPGPPSGQLEKPSGPPQIS
DAGTSGLSGEPSDQPEGPPEKPLASPPGPLKTPPSPPPGQPGKHPRPVGSSTGPPTGPSK
KPSGALLNLEPTGPPGIPPGHSPSPPEKPPEKSPGIHEKPTVQPPSLLKKPTSSPDTHQG
LPPAPPEKPTGQPTGPSGKPPGVPPRPTGKPPEISPGPAGKSTGSPGKPPVHPPGPPEML
QKPPQGLHEKPAEYPNGSLQKSTGPNPSPHEKPQGPPTGTHWKPSGPPSTPPGQLSSLPE
KSTSLPPTPAGRPTVSPGKPPVHPTGPPEKLQKPPPGLHEKRTEQPTGSLQTSSRPTPSP
HEKPPEPPTGPHWKPTGPPSTTPSQLQGLSGKPPRLPTGPADVPTRSPENPTPTTGSFEK
LPRPPTGLHEKPTDHTTGSLQKSSGPTQTLQEKPTEPPRGPHGKPTRTSSTPPGQPPSPS
GKPPGVPPGPTGKPPEISPGPTSKPTGSPGQPPVHPQGPPEMLQKPPPGLHEKRTEQPTG
SLQTSSRPTPSPHEKPPEPPTGPHWKPTGPPSTTSSQLQGPSGKPPGLSTGPADVPTRSP
ENPTPTTGSFEKLPRPPTGLHEKPTDHTTGSLQKSSGPTQILQEKPTEPPRDPHGKPTRT
PSTLPGQPPGPSGKPPGVPPGPTGKPPEISPGPTSKPTGSPGPPTVHPQGPPEMLQKPPP
GLHEKSTEQPTGSLQTSSRPTPSPHEKPQEPPTGQHWKPTGPSSTTSSQLQGSSGKPPGL
PTGHGGVPTDSPEKYTVQPPGPFEKLPRSPTGLHEKPTEHTTGSLQKSSGPTPTLQETPP
GPPRDPHGKPTRPPSTPPGQPPGPSGKPPGVPLGPTGIPPEISPGPAGKPTGSPGKPPVH
PPGPPEMLQKPPPGLHEKRTEQSIGSVQKSSRPTPRPHEKPQEPPTGPHWKPTGPSSTTP
NELQGPSGKPPGVPPGPTGKPPEISLGPAGKPTGSPGKPPVPPTGPPKMLQKPPPGQHEK
PREQPTGSFQKSSKPTPSPHEKPQEPLTGPHWKPTGPSSTTPSQLQGPSGKSPRLPTGHA
GVPTGSPEKYTGQLPGPFEKLPRQPPGLHEKHMEHTTGSFQMSSGPTPNLHDKPPGPPRD
PHGKPTGPLSTSSGQPTGPPGKPPGPPPGAGGEHTGSPEKPPVHPLGPLEKLPRPPPSLH
EKPTEKPTDLLEKSSGPHTGPHGMMPTGPTNTPPGLHPSPPGKHPGLPPGSAGEPTDSLG
KPSVHPPSPPKKLPRPPPGLNDKPTEHPTSSFQKSSGQTPNPHEESPGPLTGPLGKPTVP
SNTPPGQPPGPPGQPSELPLDLAGEPTGSPGKHHVLPPGPLEQLAMPPTRVHDKPTEQPT
GSLQKSSRPTPSPHEKPPEPPTGTHWKPTGPPSTTPSQLQGPSSKSPGLPRGPAGVPTPS
QKKHTVQRPGPEKQGPNTKPPGSLIKPPGPPSGLLQKGLQGSTSGPPQISDAETSGLPGD
PSGQPTGPPEKPLASPPGPLGTPPSPPPGQPGKPPGPLDNSTGPPTGPSKKPPGAPLHLA
GKPTDPPGIPQGHSSSPPEKPPGISPAPHEKPTVQPPSLSKKPTSSPDTHQGIPSAVPEK
LTGQPTGTSQLSSGPNPSPHEKSPGPPTGPHGKPTGPPSSPPGQPLGPSGNPPGVPGGPT
EKPPEIFPGPAGKPTSSPEKPPVHPTGPPEKLPRPPPGLHEKFKVHATGSPQYSSVLISS
PYKKPPEPPTSPQGKPTHPPNTPSGPPPGPPINPPGLHPGSYGKTTGLPNKPPVHPPGSP
ERLSRPPPGLHEKPTQQPAGSLQTSSGATTLPHEKPPEPHEKPIGPPSTPPGQHSGPPGQ
LLNPAGEPTGSLGKPPVNPPGPPEKLQKPPPGLHEKPTEQPNGSLQKSSRPTPNPHEKPQ
EPPTGQHWKPTGPSSTTPSQLQGSSGKPPGLLTGPAGVPTRSPEKYTVKPPGPIERLPRP
PPALHEKPTEHTTGSLQKSSRPTPSPHEEPQGPPTGPHWKPTGPSSTTPSQLQGPSGKPP
RLPTGHAGVPTGSSEKYTVQHPGPLEKLSRPPTGLHEKHTEHTTGSLQISSGPTPNLHDK
PPGPPRDPHGKPAGPPSASPGKPPAPPGKPLGLPPSTGGEHTGSPEKPPVHPVRPLEKLP
RPLPGLHEKPTEKPTDLLKKSSVSLTGPHGMMPTGPVNTPPGLPPSPPGKHPGLPPGPSG
EPTDSLGKPSVHPPSPLKKLLRPPPGLHEKPTEQPTSSLQKSSGQTLGPHEKSPGPLTGP
HGKPTGPPNAPPGQPPDPPGQPPELPIGLAGEPTEQPRGPTPSSHEKSPGPLTGPHGRPT
VLPNTPPGQPPGSPGKLPGLSPGLAGEPTVSPGESPAHLLVPHEKLPSSPPGLHEKPTEK
PSGSHRTSSGPSLSLHEKPPGPPTSPHRKPTGPTSAPSGPPQVHLKNFQVYLKYLLAYLQ
IHLKTH
NT seq
7941 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagattagtattggtattaagtattttattctcattttttctaaaagcttct
tcggcgcaatgtagcaacgaagctaaacctgctcctcatccaacagactgcacaaagttt
tatttatgccctggaaattttgaaatgtcctgcgggcctggaacacacttcaatcctaat
atacttgcttgtgattggcctagccgagctgactgtaaaagtggaggtccacctggagag
ccacctgttgacgcttctttggcaccatgtagcaatgaaaataaaccttctcctcatcca
acagattgcacaaagttttatttatgccctggaaactttgaaatgtcctgcggacctgga
actcacttcaacccaaaaatacttgtttgtgattggcctcaccaagctggctgtaaagtt
acagtacctggaaaaccgacaggtgcacacaaaaagcctccaggatcacttcaaagtcca
cctagggagcctacgggtcaacttctaggtcctcctgggaagattttcggttcaccggat
actcctccagaccaacctccaggttcacctgaaaagccaccaaggcccccagcaggtcta
cataaaaaacctacagaacaacaacaaggtccaaatacaaaaccaccaggttcacttata
aaaccaccaggcccaccttcaggtcaactagaaaagccatcagggccacctcaaatttca
gatgcggggacttcaggtttatctggagaaccttcagaccaacctgaaggtccacctgaa
aagccactagcatcaccaccgggtccacttaagacgcctccaagtccacctcctggtcaa
cctgggaagcatcctcgtccagtgggtagttctacaggcccaccaacaggtccctctaaa
aaaccttcaggagcacttctaaaccttgagcctaccggtccaccaggaatacctccaggc
cactctccaagtccacctgaaaagccaccagaaaaatctccaggtatacatgagaagcct
acagtacaacctccaagtttacttaagaagccaactagttcaccggacacgcatcaaggc
ttacctccagctccaccagaaaaacctacgggccaacctacaggtccatctggaaaacct
ccaggagtacctccacgtccaactggaaaacctccagaaatatctcctggtcctgctggt
aagtccacaggttcaccgggaaaacctcctgtccaccctccaggtccacctgaaatgtta
caaaagccaccgcaaggtctacatgagaaacctgcagaatatcctaacggttcacttcaa
aagtcaactggaccaaatccaagtccacatgagaagccgcagggaccacctacaggtaca
cattggaagccctctggtccaccgagtactcctccaggccaactttcaagtttacctgaa
aaatctaccagcctgcctccaactcctgctggtaggcctacagtttcaccaggaaaacct
cctgtccaccctacaggtccgcctgaaaagttacaaaagccaccaccaggtctacatgag
aagcgtacagaacaacctaccggttcacttcaaacgtcatcaagaccaaccccaagtcca
catgagaagccgccagaaccacctacaggcccacactggaagcccactggtccaccgagt
actactccaagccaactacagggactatctggaaaacctccacgactaccaaccggtcct
gctgatgtgcctacacgttcaccagaaaacccaactccaactacaggttcattcgaaaag
ttaccaaggccaccaacaggtctacatgagaagcctacggatcatactaccggttcactt
caaaagtcatcaggaccaactcaaactctacaagagaagccaacggaaccaccaagaggt
ccacatggtaagcctactcgtacatcgagtactcctccaggccaacctcccagtccatct
ggaaaacctccaggggtacctccaggtccaactggaaaacctccagaaatatctcctggt
cctactagtaagcctacaggttcaccgggacaacctcctgtccaccctcaaggtccacct
gaaatgttacaaaagccaccaccaggtctacatgagaagcgtacagaacaacctaccggt
tcacttcaaacgtcatcaagaccaaccccaagtccacatgagaagccaccagaaccacct
acaggcccacactggaagcccactggtccaccgagtactacttcaagccaactacaggga
ccatctggaaaacctccaggactatcaaccggtcctgctgatgtgcctacacgttcacca
gaaaacccaactccaactacaggttcattcgaaaagttaccaaggccaccaacaggtcta
catgagaagcctacggatcatactaccggttcacttcaaaagtcatcaggaccaactcaa
attctacaagagaagccaacggaaccaccaagagatccacatggtaagcctactcgtaca
ccgagtactcttccaggccaacctcccggtccatctggaaaacctccaggggtacctcca
ggtccaactggaaaacctccagaaatatctcctggtcctactagtaagcctacaggttca
ccgggaccacctactgtccaccctcaaggtccacctgaaatgttacaaaagccaccacca
ggtctacatgagaagagtacagaacaacctaccggttcacttcaaacgtcatcaagacca
accccaagtccacatgagaagccacaagaaccacctacaggccaacattggaagcccact
ggtccatcgagtactacttcaagccaactacagggatcatctggaaaacctccaggacta
ccaacaggtcatggtggtgtgcctacagattcaccggaaaaatatactgtccaaccacca
ggtccattcgaaaagttaccaaggtcaccaacaggtctacatgagaagcctacggaacat
actaccggttcacttcaaaagtcatcaggaccaactccaactttacaagaaacgccaccg
ggaccaccaagagatccacatggtaagcctactcgtccgccgagtactcctccaggccaa
cctccaggtccatctggaaaacctccaggtgtacctctaggtccaactggaatacctcca
gaaatatctcctggtcctgctggtaagcctacaggctcaccgggaaaacctcctgtccac
cctccaggtccacctgaaatgttacaaaagccaccaccaggtctacatgagaagcgtaca
gaacaatctatcggttcagttcaaaagtcatcaagaccaaccccaagaccacatgagaag
ccacaagaaccacctacaggcccacattggaagcccactggtccatcgagtactactcca
aacgaattacagggaccatctggaaaacccccaggagtacctccaggtccaactggaaaa
cctccagaaatatctcttggtcctgctggtaagcctacaggttcaccgggaaaacctcct
gtcccccctacaggtccacctaaaatgttacaaaagccaccaccaggtcaacatgagaag
cctagagaacaacctacaggttcatttcaaaaatcatcaaaaccaaccccaagtccacat
gagaagccacaagaaccacttacaggcccacattggaagcctactggtccatctagtact
actccaagccaactacagggaccatctggaaaatctccaagactaccaacaggtcatgct
ggtgtgcctacaggttcaccggaaaaatatactggccaacttccaggtccatttgaaaag
ttaccaaggcaaccaccaggtctacatgagaagcatatggagcatactaccggttcattt
caaatgtcatcaggaccaactccaaatctacatgataagccaccaggaccacctagagat
ccacatggtaagcctactggtccactgagtacttcttcaggccaacctacaggtccacct
ggaaaacctccaggaccaccaccaggtgctggtggtgagcatacaggttcaccggaaaaa
ccccctgtccaccctctaggtccactggaaaagttaccaaggccaccacccagtttacat
gagaagcctacggaaaaacctaccgatttacttgaaaagtcatcaggaccacatacaggt
ccacatggaatgatgcctactggtccaacaaatactcctccaggcctacatccaagtcca
cctggaaaacatccaggactaccaccaggctctgctggtgagcctacagattcactggga
aaaccttctgtccaccctccaagtccacctaaaaagttaccaaggccaccaccaggtcta
aatgataagcctacagaacatcctaccagttcattccaaaagtcatcaggacaaactcca
aatccacatgaggagtcaccagggccactaacaggtccacttggtaagcctactgttcct
tcaaatactcctccaggccaacctccaggtccacctggacaaccttcagaattaccacta
gatcttgctggtgagcctacaggttcaccaggaaaacatcatgtcctccctccaggtcct
cttgaacagttagcaatgccaccaacacgtgtacatgataagcctacagaacaacctacc
ggttcactacaaaagtcatcaagaccaaccccaagtccacatgagaagccaccagaacca
cctacaggcacacattggaagcccactggtccaccgagtactactccaagccaactacag
ggaccatctagtaaatctccaggactaccaagaggtcctgctggtgtgcctacaccttca
cagaaaaaacatactgtccaacggccaggtccagaaaaacaaggtccaaatacaaaacca
ccaggttcacttataaaaccaccaggcccaccttcaggtctactacaaaagggcctacaa
gggtctacatcagggcccccccaaatttcagatgcggagacttcaggtttacctggagat
ccttctggccaacctacaggtccacctgaaaagccactagcatcaccaccgggtccactt
gggacgcctccaagtccacctcctggtcaacctgggaagcctcctggtccactggataat
tctacaggcccaccaacaggtccctctaaaaaacctccaggagctcctttacaccttgct
ggtaagcctaccgatccaccaggaatacctcaaggccactcttcaagtccacctgagaag
ccaccaggaatatctccagctccacatgagaaacctacagtacaacctccaagtctatct
aagaagccaactagttcaccggacacgcatcaaggcataccttcagctgtaccagaaaaa
cttacgggccaacctacgggtacatctcaattgtcatcaggcccaaatccaagtccacat
gaaaagtcaccaggtccacctacaggtccacatggaaaacctactggcccaccgagttct
cctccaggccaacctttaggtccatctggaaatcctccaggagtacctggaggtccaact
gaaaaacctccagaaatatttcctggtcctgctggtaagcctacaagttcaccggaaaaa
cctcctgtccaccctacaggtccgcctgaaaagttaccaaggccaccaccaggtctacat
gagaagtttaaagtacatgcgacaggttcaccacaatattcatcagtactaatttcaagt
ccatataagaagccaccagaaccacctacaagtccacaagggaagcccactcatccacca
aatactccttcaggcccaccaccaggtccacctataaatcctccaggactacatccaggt
tcttatggtaagactacaggtttaccgaataaacctcctgtccaccctccaggttcaccc
gaaaggttatcaaggcctccaccaggtctacatgagaagcctacacaacaacctgccggt
tcacttcaaacatcatcaggagcaactacacttccacatgagaagccaccagaaccacat
gagaagcctattggtccaccaagtactcctccaggccaacattcaggtccacctgggcaa
cttctaaatcctgctggtgagcctacaggttcactgggaaagcctcctgtcaaccctcca
ggtccacctgaaaagttacaaaagccaccaccaggtctacatgagaagcctacagaacaa
cctaacggttcacttcaaaagtcatcaagaccaaccccaaatccacatgagaagccacaa
gaaccacctacaggccaacattggaagcccactggtccatcgagtactactccaagccaa
ctacagggatcatctggaaaacctccaggactactaactggtcctgctggtgtgcctaca
cgttcaccggaaaaatatactgtaaaacctccaggtccaattgaaagattaccaaggcca
ccaccagctctacatgagaagcctacggaacatactaccggttcacttcaaaagtcatca
agaccaaccccaagtccacatgaggagccacaaggaccacctacaggcccacattggaag
cccactggtccatcaagtaccactccaagccaactacagggaccatctggaaaacctcca
agactcccaacaggtcatgctggtgtgcctacaggttcctcggaaaaatatactgtccaa
catccaggtccacttgaaaagttatcaaggccaccaacaggtctacatgagaagcatacg
gaacatactaccggttcacttcaaatatcatcaggaccaactccaaatctacatgataag
ccaccaggaccacctagagatccacatggtaagcctgctggtccaccgagtgcttctcca
ggcaaacctccagctccacctgggaaacctctaggactaccaccaagtactggtggtgag
catacaggttctccagaaaaaccccctgtccatcctgtacgtccacttgaaaagttacca
agaccactacccggtttacatgagaagcctacggaaaaacctaccgatttacttaaaaag
tcatcagtatcacttacaggtccacatgggatgatgcctactggtccagtaaatactcct
ccaggcctacctccaagtccacctggaaaacatccaggactaccaccaggtccttctggt
gagcctacagattcactgggaaaaccttctgtgcaccctccaagtccacttaaaaagtta
ctaaggccaccaccaggtctacatgagaagcctacagaacaacctaccagttcacttcaa
aagtcatcgggacaaactttaggtccacatgagaagtcacctgggccactaacaggtcca
catgggaagcctactggtcctccaaatgctcctccaggccaacctccagatccacctgga
caacctccggaattaccaataggtcttgctggtgagcctacagaacaacctagaggtcca
actccaagttcacatgagaagtcaccaggaccacttacaggtccgcatgggagacctact
gttctaccaaatactcctccaggccaacctccaggttcacctggaaaacttccaggacta
tctccaggtcttgctggtgagcctacagtttcaccgggagaatctcctgcccacctttta
gttccacatgaaaagttaccaagttcaccaccaggtctacatgagaagcctacagaaaaa
ccttccggctcacatcgaacgtcatcaggaccatctctaagtctacatgagaagccacca
ggaccacctacaagtccacatagaaagcctactggtccaacgagcgcgccttctggccca
ccccaagtccacctgaaaaattttcaggtatacctgaaatacctcctggcatacctccag
atccacttgaaaacacactag
DBGET
integrated database retrieval system
