Diabrotica virgifera virgifera (western corn rootworm): 126886910
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Entry
126886910 CDS
T09922
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
126886910
Spliceosome [BR:
dvv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
126886910
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
TPR_19
TPR_CcmH_CycH
TPR_17
Acetyltransf_17
TPR_15
Motif
Other DBs
NCBI-GeneID:
126886910
NCBI-ProteinID:
XP_050510026
LinkDB
All DBs
Position
6:145939502..146065905
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AA seq
1158 aa
AA seq
DB search
MEETEASTGRKTRSSAAKTTPAVTKKEKPGPLSRKTRKKVVLMEVEVSDEEVDETVQEPV
TETMETTEESKQSENQIDAEKVNGKENKPKSIDDQVILNDVTVFCEMQTENNKTEDTEKM
EVDGDLEIKKTEDNVSSQQTDESKVKSSEKLDTKPNVSEPEVEEPAEKKIKLEEKPADTD
SNKKEVEKESENDAIKTNKGCSEEELKTESEKNEKESKDVKEKTEEETEKKQDVAKVEET
DAKVKENTDAKVKDAKVENTDSKVEENTDAKVEDANVENTDSKVEENTDAKLENTGAKVE
ENTDAKVEENTDAKVEEKVNKEEIKEEEIVKENTTEKSEMECEESKEVKEKENKVEEKEI
KEVTTEDKSEKEDEKSENQNKKGDEESLVGDAESKGDLTKVEQKEAINTEGKQDTEKETF
DKQKADPDTENISEDELPVVQAVKVPEAEEVSDEELPGPKRAELPADTEVVSEDELPTVK
NDSKKESNKRKLATDYDPGSPTSENEAPSKKPSLDSSAEKDKEEKPKPKKLPELDKYWKA
VNDDPTDFTGWTYLLQYVDQENDMEAAREAYDAFLSHYPYCYGYWRKYADYEKRKGNKKK
CEEVFERGLKAIPLSVDLWIHYLTYVKVTRTDDEEFIRSQFERAVTSCGLEFRSDRLWDS
YIKWESEAKRLQKVTAIYDRLLGTPTQGYTTHFENFQEHISNNAPNKVVDVDEFFALRKE
VRQQLKHEITDTPPADNDAPPGDEDQTKVISSDEETKILRERIISIRRKLHKNTVTAVTA
RWNYEEAIKRPYFHVKPLERCQLKNWQDYLDYETEQGDRVRIIVLFERCLIACALYEEFW
LKFVHYLENLRDHELQPKIRDVYERACTIHHLKKPNLHLQWAIFEEGVDNMSRAAEILVN
LEKSVPNVLQIAYRRINLERRRGDHEKCCQLFEHYINSTKNKIIASSISIKYSRFACFMM
KDVEKAQTILKTAIAKDPNNPRLYLQLVDVTLQKGDPTEKNITEILNMFLDKDGVDAEQK
MLFAQRKLEYLEDFGSNLQLVQEAHEQYQKLVKQHKDGLKKKEIKSETTGPSSKSKEAKQ
PPPSSQGNYGNYNAPYGPPSNQPSYPPYSGNQQGPNYYPPQYGQGDQYQYQNWQYPPQGG
YGGYNQWGGGYGGGGYGY
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggaggagacagaagcaagtactggcaggaaaactcgctctagtgcagcaaaaacaacg
cctgctgttaccaaaaaagaaaaaccgggaccactatcaagaaaaacacgtaagaaggtt
gtgcttatggaagtagaagtttctgatgaagaagtagatgaaactgttcaagagcctgta
acagaaacaatggaaactactgaagaaagcaagcagagcgaaaatcagattgacgctgaa
aaagttaacggcaaagaaaacaaacctaaatcaatagatgatcaagtgatattaaatgat
gtgacagttttctgtgagatgcagacagaaaataataaaacggaagatacagaaaaaatg
gaggttgatggagatcttgaaatcaagaaaacagaagataatgtaagttcccaacaaact
gacgaaagtaaggtaaaatcatcagaaaaattggacactaaacccaatgtttctgaacca
gaagtagaagagccagccgaaaagaaaataaaacttgaagaaaaaccagctgatactgac
agcaataaaaaagaggttgagaaagaatcagaaaatgatgccatcaaaactaataaggga
tgttcagaagaagagttgaaaactgaaagcgaaaaaaatgagaaagaaagtaaagacgtt
aaggaaaaaacggaggaagaaacagagaaaaaacaagatgtggcaaaagtagaagaaaca
gatgcaaaagtgaaagaaaatacagatgcaaaagtaaaagatgcaaaagtagaaaataca
gattcaaaagtagaagaaaatacagatgcaaaagtagaagatgcaaatgtagaaaataca
gattcaaaagtagaagaaaatacagatgcaaaattagaaaatacaggtgcaaaagtagaa
gaaaatacagatgcaaaagtagaagaaaatacagatgccaaagtagaagaaaaagtaaac
aaagaggaaataaaagaagaagagatagtaaaagagaacacaacagaaaaaagtgaaatg
gagtgtgaagaatcaaaagaagttaaagaaaaagaaaataaagttgaagaaaaagagatc
aaagaggtaacaactgaagataaaagcgaaaaggaagatgaaaaatcagaaaaccaaaac
aaaaaaggcgatgaagaatcattagttggagatgcagaaagtaaaggtgatttgacaaaa
gttgaacaaaaagaagctataaatacagaaggaaaacaagatacagaaaaggaaactttt
gataagcagaaagctgatccagatactgaaaatatatccgaagatgagcttcctgttgtt
caagctgtaaaagtaccagaagctgaggaagtttcagatgaagaacttccagggcccaaa
agagctgagcttcctgcagatactgaagtcgtctccgaagatgagctccccaccgttaaa
aatgattccaaaaaagaaagtaacaagagaaagcttgccactgattacgatcctggatcc
ccaacatccgaaaatgaggcaccttctaaaaaaccatctcttgatagttcggctgaaaag
gacaaagaagaaaaacctaaaccgaagaaattaccagaacttgataaatactggaaagcc
gttaatgatgatccgactgattttactggatggacatatttattacaatacgttgatcaa
gaaaatgacatggaagctgccagagaggcttatgacgctttcctatctcattatccgtat
tgctacggttattggcgaaaatacgctgattacgaaaaaagaaagggaaataaaaagaaa
tgcgaagaggtatttgaacgaggtttgaaggcgataccgttatctgttgacttgtggatt
cattatttgacgtacgttaaagtaacccgaaccgacgatgaagaatttattcgatctcaa
tttgaaagggctgtaacatcatgtggcttggaatttagatctgatagattgtgggattca
tatatcaaatgggaaagtgaagcaaaacgattgcaaaaagtgacggcgatatatgacagg
ttgttgggtactccaacgcaaggatacacaacccattttgaaaatttccaagaacatata
tctaataacgcaccaaacaaggtagtagacgtagatgagttttttgctttgcggaaggag
gttaggcagcaactcaagcacgaaataactgataccccaccagcagacaatgacgcgcca
cctggtgatgaggatcagaccaaagtgattagttccgacgaagaaacaaaaattcttaga
gaaagaataatttcaattcgaagaaaactccataaaaatacggtgaccgcagtgactgct
agatggaattatgaagaagcgataaaacgtccatattttcatgtaaaacctttagaacga
tgtcagcttaaaaactggcaagattacttagattatgagactgagcagggagacagagtg
agaataatagtattgtttgaaaggtgtctcatagcatgtgctctatacgaagagttctgg
ttaaagtttgtgcattatcttgaaaatcttagagaccatgagctacagcctaaaataaga
gatgtgtatgagcgagcttgtactattcaccatctaaaaaaaccaaatctccatttgcaa
tgggccatttttgaggagggtgttgacaatatgtctagagcagcagagatattagtaaat
ttggaaaagtctgttccaaatgttttacagattgcttatcggcggataaatttagaaaga
cgacggggcgatcacgaaaaatgttgccaacttttcgaacactatataaatagtacaaaa
aacaaaatcattgccagcagcatatcaataaaatattccagatttgcttgctttatgatg
aaggacgttgaaaaagcacaaacaattttaaaaaccgctattgctaaagatccaaataat
cctagactgtatttgcagcttgttgatgtcactttacagaagggagatccaactgaaaaa
aatatcactgaaatcctaaatatgtttttggacaaagatggtgtagatgctgagcaaaag
atgttgtttgctcaaagaaaattagaatatctcgaagattttggtagtaaccttcagtta
gtacaagaagctcatgaacaatatcaaaaattggtcaagcaacataaagatggactaaaa
aagaaggaaattaagagtgagacaacggggccatcgtcaaaatcgaaagaagccaaacaa
ccgcctccatcatcccaaggaaattatggaaattataacgctccatatggaccaccatca
aaccaaccatcatatcccccgtattctggtaatcaacaaggacccaactattatcctccc
cagtacggtcaaggagatcaataccaatatcaaaattggcaatatccaccacaaggtggc
tatggtggatataatcaatgggggggcggttatgggggaggaggatatgggtactaa
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integrated database retrieval system
