Diabrotica virgifera virgifera (western corn rootworm): 126886924
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Entry
126886924 CDS
T09922
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03430
Mismatch repair
dvv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
126886924
03460 Fanconi anemia pathway
126886924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dvv03400
]
126886924
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
126886924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
126886924
NCBI-ProteinID:
XP_050510043
LinkDB
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Position
6:146893616..146999850
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AA seq
749 aa
AA seq
DB search
MNTCIEEHDTENNNDQIIKPINKDTVHRICSGQVVLSLAVAMKELVENSLDAGATIIDIN
LREYGSELLEVIDNASGVKPENFESLTLKHYTSKIREFDDLQSLGTLGFRGEALSSLCAL
SDLVVITRHELSECGTKIIYDRNGKIVEQTPLARGKGTTVTLTKLFSTLPVRRKELMKNL
KKEFNKMCQMLYAYCLVSKSVKFTCTNTLSSGSKNTVVATDGKDTIRDNIINVFGSKQIS
SLIDVTLVPPTEEILTEFGIKQFLDEPLPFDLEFLISSVIHGSGRSANDRQFYYINSRPC
EPSKIMKLVNEVYKSYNSHQYPFVYLNISTKSIFVDVNITPDKRQVFLENEKLLLAAIKS
SLLAVCKQFPSTYKLQNLNLSVFTPADKGVKRSLTDSSIKQGSITERFKKRSKTDESSEK
SKVSIKDFAAKPKDKGSVSNGIGFKVDKNILDESQEKLDELIEIACKLTKEEKNDDGDQS
SNASDCIVDNIVVSLDQPVNGIQRRSKAFNITLDEIKKCKEIADHTSKESIKVKFRSEIK
SEQNKSAEEELQKQISKSDFRDMVVIGQFNKGFIITKLNDDLFIIDQHATDEKYNYEQLQ
LNTVIDSQILVNPKLLELTAGNECLLIENLHVFKKHGFSFKIDEDAPCTKKVSLSAIPIS
RSFVFSKEDIIEMLYMLQVSSQSCVPSKLKKMFASRACRKSVMIGTDLSKTDMKKLIDHM
GEIDQPWNCPHGRPTMRHLINLRLLDRNK
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatgtatagaagaacatgatactgagaacaataatgaccaaataataaaacca
atcaataaagatactgtacacagaatatgctctggccaggtcgtgttgagtttggcagtc
gccatgaaagaattagttgaaaactcccttgatgcaggtgcgactattatagatataaat
ttaagagaatatggatctgaattacttgaagtaatcgacaatgccagcggagttaaacct
gaaaactttgagtcattaaccttaaaacattatacttcaaaaatacgcgagttcgacgat
ttacaatcattagggacacttggttttagaggggaagctttaagttctttgtgtgcatta
tcagacttagtggttatcactaggcatgaattatctgaatgtggaaccaaaattatatat
gatagaaacggcaaaattgttgagcaaacaccactagccagaggaaaaggtactactgtt
acattaaccaaactcttttcaacgttaccagtgagacgcaaggagttaatgaagaactta
aaaaaggaatttaataaaatgtgtcaaatgttatatgcgtattgtttggtatccaaaagt
gttaaattcacgtgtacaaatactctctcttctggttcaaagaacacagttgtagctacc
gatggcaaagatacaattcgagacaatattataaacgtttttggttccaaacagatatca
tcattaatagacgtaacactggtccctccaacagaggagattctaacagaatttggaata
aaacaatttctagatgaacctttaccgtttgatttagagtttttaatttctagcgttatc
cacggctctggtagaagtgctaatgatcgacaattttattatataaattccagaccttgt
gagccttccaaaattatgaagttagttaacgaggtatataaatcttacaattctcatcag
tatccgtttgtgtatttaaatatttctacaaagtcgatatttgtggacgtcaacataact
ccagataaaagacaagtttttttggaaaacgagaaacttttattagctgcaataaagtct
tcattattggcagtttgtaaacagtttccctctacctataaattgcaaaatttaaatctt
tctgtattcacaccagcagataagggtgtcaagagaagtctgactgatagttcgataaaa
caaggaagtattacagaacgttttaaaaaacggtcaaagactgacgaaagctccgaaaag
tctaaagtttcaataaaagattttgcagctaagcccaaagataaaggaagtgtaagtaac
ggtattggttttaaagtagacaagaatattttagacgaatctcaagagaagttggacgaa
cttattgaaatcgcttgtaagcttaccaaagaagaaaaaaatgatgatggtgatcagagt
tcaaacgctagtgattgtatagtagacaatatcgtagtaagtcttgatcaaccggtgaat
ggcattcaaagaaggtctaaagcatttaatataaccttggacgaaataaaaaaatgcaaa
gaaatagctgatcatacttcaaaagaaagtattaaagtaaaattcagatctgaaattaaa
tccgaacagaacaaaagtgcagaagaagagctgcagaaacaaattagtaagtcagacttt
agagatatggttgtaataggtcagtttaacaaagggtttataatcacgaaattaaacgac
gatttgtttattattgatcaacatgctaccgatgagaaatacaattacgaacaactccag
cttaataccgtaatagattcgcaaatacttgtgaatcccaaacttttggaattaaccgcg
ggaaacgagtgtttattgattgaaaatttacatgtatttaagaaacacggattttccttt
aaaatagacgaggacgctccgtgtaccaagaaagtttctttgagtgctattccaataagt
agaagttttgtattttccaaagaagatataattgaaatgttatatatgttgcaggtttcg
agtcagtcatgtgtacctagcaaacttaaaaagatgtttgcgtcaagagcttgcagaaaa
tctgtaatgattggtacggatctcagtaaaacggatatgaaaaaattgatagatcatatg
ggagagattgatcaaccatggaattgtcctcatggaagacccacgatgcgacatttaata
aatttgcgtctattagatcgaaataaatga
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