Diabrotica virgifera virgifera (western corn rootworm): 126887098
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Entry
126887098 CDS
T09922
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126887098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126887098
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
126887098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Co_AT_N
Motif
Other DBs
NCBI-GeneID:
126887098
NCBI-ProteinID:
XP_050510392
LinkDB
All DBs
Position
6:complement(197120834..197197868)
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AA seq
969 aa
AA seq
DB search
MPSENMEVKQVPDQDKIKMLGFDNISDFMKDGFKTLMEAIKHSNSLPQGSDWNFYHAHET
FNKIMNEESGKVLKQINGILRTNHIEGNVRNRCLEEKTDLIVEGNDNILERVANDIDEMN
GIKKAGVAPVLIQNVSAELPINGSWNRFNDVKFSVTPTITPQVNLQDPKNTVTLIAAKNV
IRPQKFFRDKIINSSKFPWEPRIKIKPNSIKPLAIFLEETENGEEYSHPYEFELDRFTPL
PIQLKKENPLKPLPVEETPLIEITEEGQLDELVETLLNCQEFAVDVEHHSYRTFMGITCL
LQISTREKDYIIDALALRDKLWVLNEAFTKPTIIKIFHGADSDIVWLQRDLSIYVVNMFD
TYQAAKQLEISGLSLAYLMQRYCSFVPNKQFQLADWRIRPLPDELKQYAREDTHHLIYIY
QMLKNDLLKKANGSDNLLLAVINNSTETCKKRYFRPVLRDDSHLDFYRKCKRHFDNRQLY
ALKQIYKWRDELAREEDESIGYVLPNHMLLQIAETLPREMQGVLACCNPIPPLVKANLLE
IHQIILRAKEQPLEKPIFKEDTRARGSTKKISKINVDSPLNCPHDLTKANEFRDDLPTIL
GNNSPSLMNLSNGKLENETDKPKCSVFFTPDNSEDEEKKNKINFKFLRPFERYKLVRSYI
QAEEEKSAEAENVENVNQNQEEVVTMTDEQRIEEIRQHFLKLSKSGPVAPEPELSLVQMG
GTKRKRDHSPSVREQSASVHPVFLSMSREVTNSRGDNNIHKRKSSDNADGAPPDKIRNTN
KHKQKQQRRKAVREQEQRRFMRNEESEENQLDGQNRTDSSTRSHEFNKQHQQKRQRFKNK
QKQKKKFQQNQTRPENGHDNENSEVDNQNSEVDNQNSEVEFKPFDYSSVDFRQFQGGAGS
VSKPQEVKSTIRFKKQKQGANKNNNKSAFFKHIGGKGGHRGGGRGGGGRGGGGRGGGGAR
GGGRPGRSY
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgaaaatatggaagtaaaacaagtccctgatcaagataaaataaaaatgttg
ggatttgataacatttcagattttatgaaggatggttttaaaacattaatggaagccata
aaacactcaaatagtctaccacaggggtctgactggaacttttatcacgctcatgagacc
tttaacaaaataatgaacgaagaaagtggtaaagttcttaaacaaataaatggtatatta
agaactaatcatatagaaggaaatgttcgtaatagatgtctagaagaaaaaacagatttg
atagtagaaggtaatgataacattcttgaaagggtagcaaacgatattgatgaaatgaat
ggtattaagaaagcaggagttgcaccagttttaatacaaaatgttagtgctgagttacca
attaatggatcttggaacagatttaatgatgttaaattttctgtaacacctacaataact
ccacaggttaatttacaagaccctaagaacactgttacattaattgctgcaaaaaatgta
attagaccacaaaaattctttagggataaaattattaatagtagtaaatttccttgggaa
ccaaggattaaaatcaaacctaattcaataaaacctttagccatctttctggaagagact
gaaaacggagaggaatattctcatccttatgaatttgaattggacagattcacaccattg
ccaatacagttaaagaaagaaaatcctttaaaaccactacctgttgaagagacaccctta
atagaaattacagaagagggacaattggatgaattggtagaaactttattaaactgtcaa
gaatttgctgtagatgtcgaacatcattcatatagaacttttatgggtattacttgtctg
ttgcaaatttctactagagagaaagattatataatagatgcattggcattaagagataag
ttgtgggtacttaatgaggcattcaccaaaccaacaattattaagattttccatggagct
gactcagatattgtgtggctacaaagagatctatcaatatatgtcgtcaatatgtttgat
acctatcaagccgcaaaacaattggagatttccggcctctcgttggcgtatctaatgcag
aggtattgtagttttgtccccaacaaacaatttcagttagctgattggcggatacgacct
ttgcccgatgaactgaagcaatatgctagggaggatacccaccatttaatttatatatat
caaatgttgaaaaatgatcttttaaagaaggccaatggttccgataacctgttacttgct
gtaataaataacagtacagaaacttgcaaaaagagatatttcaggcctgtacttagagat
gacagccacttagatttctatagaaaatgtaaaagacattttgataataggcaactctac
gccctaaaacaaatttacaaatggagagatgaactagctagagaggaagatgaatctata
ggatatgttctaccgaatcatatgttacttcagatagctgaaacgttgcctagagagatg
cagggagttttggcttgttgcaatccaattcctccactagtaaaagcaaacttgttggag
attcatcagattattttaagagccaaagaacaaccattagaaaagcccatatttaaggaa
gatactagggcaagaggaagcactaagaaaatatcaaagataaatgtggatagcccgtta
aattgtccacatgatttgacaaaagcaaacgaatttcgagatgatttgccgactattttg
ggaaataatagtccaagtttaatgaacttgtcaaatggaaagttagagaatgaaactgac
aaaccaaaatgttcggtattctttacaccagataattcggaggatgaagagaagaaaaat
aaaatcaactttaaatttttgagaccgtttgagaggtataagttggttagaagctatatt
caagcagaagaagaaaagtcggcggaagctgaaaatgttgaaaatgtaaatcaaaatcaa
gaagaagttgttactatgactgacgagcagagaattgaggagattcgacaacacttttta
aaactttcgaaaagcggtcctgtagctccagaaccagaattgtccttggtacagatgggt
ggtacaaaaagaaaacgggatcattctccctctgtgagagaacaatctgcatctgtacat
ccggtatttctatcaatgtctagggaagtaactaatagcagaggggataataatattcat
aaaaggaaatctagtgacaatgcagatggggcgcctccagataaaataaggaatacaaat
aaacataaacaaaaacaacagaggaggaaagcagttagagaacaagaacaacgaaggttt
atgaggaacgaggaaagtgaagaaaatcaattggatggccaaaatcgcactgactcatca
acccgatcacatgaattcaataagcaacatcaacaaaaacgtcaaaggtttaaaaacaaa
caaaaacaaaagaaaaaattccaacaaaaccaaacacgtccagaaaacggtcacgataat
gaaaatagtgaagtagataatcaaaatagcgaagtagataatcaaaatagcgaagtagag
tttaaacctttcgattatagttcagtcgattttcgacaatttcaaggtggcgctggtagt
gtttccaagcctcaagaggtcaagagtactattcgatttaaaaaacaaaaacaaggggcc
aataaaaataacaacaaatcagccttctttaaacacataggaggaaaaggaggtcatcgt
ggtggaggaagaggcggtgggggaagaggtggtgggggaagaggtggtgggggagctaga
ggaggaggaagaccagggagaagttactaa
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