Diabrotica virgifera virgifera (western corn rootworm): 126887133
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Entry
126887133 CDS
T09922
Name
(RefSeq) nuclear factor NF-kappa-B p110 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04620
Toll-like receptor signaling pathway
dvv04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
126887133
04624 Toll and Imd signaling pathway
126887133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dvv03000
]
126887133
Transcription factors [BR:
dvv03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
126887133
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Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
126887133
NCBI-ProteinID:
XP_050510447
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All DBs
Position
6:199791001..199938222
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AA seq
900 aa
AA seq
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MLTENYFSDYTSLEKSNMSYPNMLTPPSSSEDSPHSTYLVASPSSNTFEYDNYEYAPVQP
IIYPKPTVIVDPNLLTVKMEGPTTPSATLHFVEQPTDRFRFRYKSEMAGTHGSLTGINSD
KSRKPTYPTVELRNCGNHDKVVIRCSIYQANANPKGFYPHAHRLMMKRGREEFDDPHDVE
VGHEDGFRAVFQGMGIIHTAKRNLVTELVRKKVQLQEEHVARTENRRGLTQKEVVEIKGL
AESESKSINLNIVCLRFDAYIKKNGILFPLCEPIFSHSINNLKSALTGDLKIVRLDHVVS
PAKGNKEVFILVERVTKKNIKIRFYELDDDENVVWEGWGQFNDLDVHHQYAIVFKTPKYR
DENITSPVNVFVELVRPSDQARSEAREFRYVPNKNMAKPGQKRARYDYYSSSSYDSSNVG
SEELPAVINTLQIGQDSHMSFNNIPSGLSDEIKRALTDMNSDEFQQLHDAHADEYLTLLE
NLATDGVNANSMPVRKQRRDIQIQEPIKMEVSNEDKRMAIMVVSELRSFIRTTHTAANAI
TILNKYFNADNCTNALHVCAALRDNDSAMLLLKVIAVYRVFHLLDKTNDQNLTALHIAVM
CHNKDLTKALVLCNSKLSVTDSNLNTVLHIAIKSNVPIEIFETLLRPSRYTSVDQVKGFI
DMVNLDGNTALMMAVEANKLAYVKLLCFKNADVNKKQPKNGFVPLRIAIEKQHTDIIRYL
LSLEQTDPTIKDFTNISPLVAGIMKTENEEIRRIIENYMKSNNIVLDIKEEPEETDDEMD
VEFQDVEVKTEKREFSPEELEELYEGIHSLTPQCLDTVSSILDIHDNWKNLAQLLEMEHL
VDSGMIKSEAKAILTHAIEANHDWTNPTCIFALRNFLENLDEIEAVEVMDKMVFELKNKT
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgttgacagaaaattattttagtgattatacttcccttgaaaagagtaatatgtcttat
ccaaatatgttaacaccaccttcaagttctgaagattctccacattcaacttatttagtg
gcatcacctagttctaatacatttgaatatgacaattatgagtatgctcctgtacaacct
attatctacccaaagcctactgtcattgtagatcctaatttactcacggtaaaaatggaa
ggtccaacaacaccctctgcaacactacactttgtagaacaaccaacagatcggtttaga
tttcgctataagtcagaaatggcgggaacccatggaagtcttactggtattaattccgac
aaatcgaggaaaccaacatatcccacagtagaactaagaaattgtggcaatcacgacaaa
gttgttataagatgttcaatatatcaagcaaatgcaaaccctaaaggtttttatcctcat
gctcacagattgatgatgaaaagagggcgtgaagagttcgacgatcctcatgatgtggag
gttgggcatgaagatggctttagagccgtatttcaaggaatgggaattattcacaccgca
aagagaaatctggtaactgaattggtaagaaaaaaggttcaactgcaagaggaacatgtt
gccagaacggaaaacagaagaggattgacccagaaggaagtagtagagattaaggggttg
gctgagagcgaaagtaaatcaattaatctgaacatagtttgtctaaggtttgacgcttat
attaaaaagaatggtatattatttcctctttgtgagcctattttttcacatagtatcaac
aatttgaagagcgccttaacgggtgatcttaaaattgttaggctagatcatgtcgttagc
ccagcgaaaggaaataaagaagtcttcatattggttgaaagagtcacgaaaaaaaatatt
aaaatccgattctatgaacttgacgatgacgaaaacgttgtttgggaaggttggggccaa
tttaacgatttggatgtccatcaccaatacgcaatcgtatttaagacacccaaatataga
gatgaaaacatcacttctccagtcaatgtcttcgttgaattggtacgaccgtcggaccaa
gctcgctcagaagcgcgagaatttagatacgtaccaaataaaaatatggccaaacctggg
caaaagcgtgcccgatacgattattactcgtcttccagctacgatagttccaatgtagga
agcgaagaattaccagctgtaatcaatacacttcaaattggacaggactctcacatgtcc
tttaataacattccaagcggtttaagtgacgagataaaaagagctctgactgatatgaac
tctgatgagttccaacaactacatgacgctcacgctgatgaatatcttacactactagag
aatttggctactgatggagttaacgctaactctatgccggtaagaaaacaacggcgtgac
atacaaattcaagaaccgatcaaaatggaagtttcgaacgaagacaagagaatggcgata
atggtagtaagtgaattgagaagttttataaggactacacatacagcagcaaatgccata
acgatattaaacaagtattttaatgcagataattgtaccaatgcgcttcacgtttgtgca
gctcttcgagataatgattcggctatgctgttactgaaagtaatagcagtctatagagtg
tttcatttattagataaaaccaacgaccaaaacttaacagccttacatatcgcagttatg
tgtcataataaggatttgactaaggcattagtattatgcaattctaaactgtctgttaca
gatagtaatttaaacactgtcttacacatagcgataaaatccaatgttccaattgagatt
ttcgaaactcttttaaggccctcgagatatacttccgtggatcaggtgaaaggctttatt
gacatggtaaacctagatggaaataccgcattgatgatggctgtcgaggcaaataaatta
gcttatgtcaagcttttgtgcttcaaaaatgcagatgtaaataaaaaacagccgaagaat
ggttttgtaccattaagaatagcaattgagaagcaacatacggatataattcgatattta
ctttctcttgaacaaacagaccccactattaaagattttactaatatttcaccactcgtt
gccggtattatgaaaacggaaaatgaagaaattcgacgtattattgaaaactatatgaaa
tcaaataatattgtgttggatatcaaagaagaaccagaagagaccgatgatgaaatggac
gtcgaatttcaggacgttgaagtcaaaacagaaaagcgagagttttcaccagaagaactg
gaggaactttacgagggtatccacagtttaacaccgcagtgtttggacacagtttcaagt
attttggacatacacgataattggaaaaatctggctcaattattggaaatggaacattta
gttgatagtggtatgatcaaatccgaagcgaaagcaattttgactcatgcaatcgaggcc
aaccacgattggacaaatccaacctgtatctttgcgttacgtaactttttggaaaacttg
gacgagatcgaagctgttgaagttatggacaaaatggtttttgaacttaaaaataagaca
taa
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