Diabrotica virgifera virgifera (western corn rootworm): 126887177
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Entry
126887177 CDS
T09922
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126887177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126887177
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126887177
mRNA degradation factors
5'-3' decay
Decapping complex
126887177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
CAMSAP_CKK
Creatininase
Uteroglobin
Motif
Other DBs
NCBI-GeneID:
126887177
NCBI-ProteinID:
XP_050510520
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Position
6:208844508..208934202
Genome browser
AA seq
1082 aa
AA seq
DB search
MASSLVGPKPGTVQNIKYSGSDAEFCTDVTGETVIISSNDGSHTHGSSKLKLIDRIDYNW
EFRYYHGHLVAAHINGKVIAYAMKGKEGGMVRVTNQETGIRALIKNFKDDIKDIAFAYIR
EEIILGCVDSEGNILVYKITDETNSISSTLLLHVYHHHRSSISKSNYRLIWCPYVPPIDD
DEDVDTVVDPDKMFVVLNGTRASIYNLSMLSEKCLVSNIIDPDESFEGYIEINHNAEVLD
ASFASDGTHIAIATGDGYVKFIQLYFYNSEKQKSLFEFRPHDGTPLSSLMFIDKILEPSS
ECWKFLITGANDNSVIKLHSCETWSCLQTIHFKPHPNSISGLYLNVSTDYTGQYLLVSDI
NYRVLYVLELNRNDKEQRVQVTRMAGFLLPAPFLSFHILEATSRIMPFSYNNSTEDEFYE
DRDEFDEDSERTAICLKMLVIQPKKFQECNIVFEPETMSYNSLNNSAEVMEKTEKFPKLD
DLQESVSLLIQQKSSSNLTLMTPDDFTPSGRNTRPNSVRNDTSNSLEASIAEINDVVVDN
LIDFQRPQKDNFASGGSSPSREVQEILSLNNSTYSTQDFFDNLPKLQDNQEEPQKDYSNH
TSLNYPDKITNESVVKCWQNVPVVQENEIIKDEALRKELRLSAGDEKSQFQLLGYRINAL
ENIVREQNVLIEKIHGDKKEVDLALSNQQLQIMKMLETLVTMQKTTERDLQENILTGVSQ
IFTKSLADKVQQILASEVKMVILPAIQSQVESYRHQLESQYAQKISHTDMMLRDNIAKAF
NNKALADTLSLSVVNIVAPSLEKCYRDIISSSLIPSWERVCGQMFQQINETFTRGTKEYT
ASVESYMDKQRRVQEKGKDLIVQMQNVSETMKTNADKLTSNLTTEIHKQFQTVFKSMNDK
LTSNIREIVMEQVKQGFKSHATVIEDSVMNAVRSRAVTPSPLLDSHVTTMNQIQLFISRH
NYNDAFQIALSAENLAYVIHVCERVDIQTLFGEECLLQQSCLLALIQQLSLELNKNTDLK
LSYIRAAFLSLSPDCTATKHFIPKVLKDLLKQLNLFIQSNPPMKQLKEAKLIKMAVESML
VK
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctccctggtaggccccaaaccgggtacagttcagaatattaaatactccggt
tctgatgctgagttttgtacagatgttacgggtgaaacagtaatcatttccagtaatgat
ggcagtcacactcatggaagttccaaactgaaattaatagatagaatagactataactgg
gaattccgttactatcatgggcaccttgttgcagctcatattaatggaaaagttattgca
tatgcaatgaaaggaaaggaaggtggtatggtgagagttaccaaccaagaaactggtata
agagctctaataaagaattttaaagatgatattaaggacattgcttttgcctatataaga
gaagaaattattttaggttgtgtagatagtgaaggaaatatattagtctacaaaataact
gatgaaacaaattcaatatcatctacattacttttacatgtatatcatcatcatcgttcg
agtatatcgaaaagtaattatagacttatatggtgtccttatgtgccccctattgacgac
gacgaagacgttgatacagtagttgatccagataaaatgtttgtagtactgaatggaacc
agagcctcaatatacaatttaagtatgttaagtgaaaaatgtcttgtaagcaatataatc
gatcctgatgaaagctttgaagggtacatagaaattaatcacaacgctgaagtactagat
gcttcatttgcttcggatggtactcacatagccatagcaactggagatggatatgttaaa
tttattcaattatatttttataactcggagaagcaaaaatcgctttttgagtttagacct
catgatggtactcctctttcgtccctgatgtttatagataaaatcttggagcccagttca
gagtgctggaaatttttaataacaggagcaaacgacaattccgtaataaaattgcattct
tgtgaaacttggtcctgcttacaaacaatccactttaaaccccatcccaattcaatatct
ggcctgtatctcaacgtgtcaactgattataccggtcaatatctattagtatcagatatt
aactacagagttctgtatgtgttagaattaaacagaaatgacaaagaacaaagggtgcaa
gtcacaaggatggcggggtttttacttccagcccctttcctaagttttcacatattagaa
gctactagtcgtattatgccattttcatacaataatagtacggaagacgaattttacgaa
gacagagatgaatttgatgaagattcagaaagaacagcaatttgcttgaaaatgttagtt
atacaacctaagaagttccaagaatgtaatatagttttcgaacctgaaactatgtcttat
aattcgttaaataattctgcagaagtgatggagaaaaccgaaaaattccccaaattggac
gatctacaagaatcagtatctttgctcatacaacaaaaaagcagttcaaatttgacttta
atgacaccagatgactttacaccttcagggcgcaatacacggccgaacagtgttagaaat
gataccagcaattctttagaagcatctatagctgaaataaatgacgtcgtcgttgataat
cttatagatttccaaagacctcagaaagacaattttgccagtggtggttctagtccgagc
agagaggtgcaagaaatattatctttgaataattctacgtacagcactcaagacttcttt
gacaatcttcccaagcttcaagacaatcaagaggagccccaaaaagactactcaaatcac
actagccttaactatccggacaaaataactaatgaatcagttgtaaaatgttggcaaaat
gtgcctgtggttcaagaaaatgaaattataaaagacgaagctctaagaaaagaattaaga
ttaagtgctggcgatgaaaaatcacagttccaactactagggtatcgtattaatgcctta
gaaaacatagtgcgagaacaaaacgttcttatcgaaaaaatccatggcgataaaaaagaa
gtggatttggccttatcaaatcaacaattacaaatcatgaagatgttagaaacgctcgtt
accatgcagaaaactactgaacgagatttacaagaaaacattttgactggggtcagtcaa
attttcacgaaatccttagcggacaaggtacagcagatccttgcgagtgaagttaaaatg
gttattttaccagctattcaaagtcaagtggagtcatacagacatcagcttgaaagtcag
tacgctcaaaaaataagtcataccgatatgatgttaagggataatatcgcaaaagctttt
aataataaggcactggcagatacccttagcttgtccgttgtaaacatcgtagcacctagt
cttgaaaaatgttatcgggatataatttcttcatctttaataccgtcctgggaacgagta
tgtggacaaatgttccaacaaattaacgaaacatttactcgaggtaccaaagaatatact
gcatcagtagaaagctacatggacaaacaaagaagagtgcaagagaagggaaaagatttg
atagtacaaatgcaaaatgtctcagaaaccatgaaaaccaatgctgacaaattaactagc
aatttgacgactgagatacataaacagtttcaaacggtttttaaaagtatgaacgataag
cttacgagtaatatacgagagattgtgatggaacaggtaaaacaaggattcaaaagtcac
gctactgtcatagaagacagtgttatgaatgcagtccgatcaagggcagttactccatca
ccacttctggattctcatgtgactaccatgaaccagattcaactttttatatcaagacac
aattataacgacgcctttcaaatagcactaagcgctgaaaatttggcttacgttattcac
gtgtgcgaacgtgttgacatacaaactttgttcggcgaagaatgtcttttacaacaaagt
tgtctgctagcccttatccaacaactgagcttggagttaaataagaatacagatctgaaa
ttaagttacattcgtgctgcgttcctgtctttatcgccagattgtacagcaacaaaacat
ttcattccaaaggttttgaaagatttgttaaagcagctgaacctctttattcagtcgaat
ccaccaatgaaacaattaaaagaagcaaaacttattaaaatggctgtggaaagcatgtta
gttaagtga
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