Diabrotica virgifera virgifera (western corn rootworm): 126887513
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Entry
126887513 CDS
T09922
Name
(RefSeq) TNF receptor-associated factor family protein DDB_G0290965-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04013
MAPK signaling pathway - fly
dvv04120
Ubiquitin mediated proteolysis
dvv04137
Mitophagy - animal
dvv04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126887513
09130 Environmental Information Processing
09132 Signal transduction
04013 MAPK signaling pathway - fly
126887513
04310 Wnt signaling pathway
126887513
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126887513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dvv04121
]
126887513
Enzymes [BR:
dvv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126887513
Ubiquitin system [BR:
dvv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
126887513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
DUF4560
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
126887513
NCBI-ProteinID:
XP_050511099
LinkDB
All DBs
Position
1:17968652..18047195
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AA seq
406 aa
AA seq
DB search
MVTITNMITIEALMTFEKNLISKFECPVCFKYMNPPIRLCLSGHSYCNQCFEKLKNCALC
RANKSPYRCIVLEQIHATLTFPCRYLDQGCNFSGKGDLMTTHQEYCEFSSVLCPLSMATN
ETIVKSLISNFECPVCFKYMHPPIGQCVSGHSFCTHCFETIENCALCKAEKSPYRCILLE
QIHACLLFPCKYCDQGCIFSGKSDSLTTHEEYCEFSSVSCPLRFVRYRSCNWKGMRSEII
GHCKTNHPGKIVFQKEITRTVTTFYPVADRRKIHYQYHYILLYIHDTLFRCYWDVNAESG
LMRFAVYSLDKPSFDKTFLFKIGIFLKNTGKEVVSLLGPCYPLKNDNNKFIGNMYLTTNF
DMIKDLCDTSGTLRYSIEIIDRKLVLPQIIDIENKTENEIENKIKS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggttaccataacaaacatgataactatcgaagctttgatgacttttgaaaaaaacctc
atcagcaaatttgagtgccctgtatgcttcaaatacatgaatcctccaataagactatgt
ctctctggacatagctactgcaatcaatgttttgaaaagcttaagaactgtgctttatgt
agagccaacaagagcccttaccgatgcatcgtattggagcaaatacatgcaactctcaca
tttccatgtagatatcttgatcagggatgcaattttagtggaaagggtgacttaatgaca
actcaccaggaatattgtgaattttcttcagttttatgcccattgagcatggcaactaac
gaaactattgtaaaaagcctcattagtaatttcgagtgccctgtttgctttaaatacatg
catcctccaataggacaatgtgtgtctggacacagcttttgcactcactgttttgagacc
attgagaactgtgctttatgtaaagctgagaagagcccttaccgatgcattcttttggag
caaatacatgcctgtctcttatttccatgcaaatattgtgaccagggatgcattttcagt
ggaaagagtgactcactgacaacccatgaggaatattgtgaattttcttcagtttcatgc
ccactaaggtttgtaagatacaggagctgcaattggaaaggaatgcgatctgaaataata
ggccattgcaaaaccaatcatccgggtaaaatagtgtttcaaaaggagataacccgaaca
gtcacaactttttacccagttgcagacagacgcaaaatccactatcagtatcactacata
ctactgtacatacacgacactctgttccgttgctattgggacgtaaatgcagaaagcggc
ttaatgaggtttgctgtgtactctttggataaaccatcgttcgacaagacattcttattt
aagattggaatatttttaaaaaacacaggaaaagaagtagtttctttgctaggaccctgt
tacccactgaagaatgataacaacaaattcatcggaaacatgtatttgacgacaaatttt
gatatgattaaagatctttgtgacactagcggtactcttcgctattcgatagaaattatt
gatagaaaacttgttctaccacaaattattgacatcgaaaataaaactgaaaatgaaatt
gaaaataaaattaaaagttaa
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