Diabrotica virgifera virgifera (western corn rootworm): 126887702
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Entry
126887702 CDS
T09922
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126887702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dvv03032
]
126887702
03400 DNA repair and recombination proteins [BR:
dvv03400
]
126887702
DNA replication proteins [BR:
dvv03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
126887702
DNA repair and recombination proteins [BR:
dvv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
126887702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
BRCT_3
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Fes1
Motif
Other DBs
NCBI-GeneID:
126887702
NCBI-ProteinID:
XP_050511327
LinkDB
All DBs
Position
7:85227750..85482696
Genome browser
AA seq
1240 aa
AA seq
DB search
MDKLRILFVCPQNYADESESSEVMLQAFEVCKQNVNTNVSWIKESKFKSLTLNKTDFVVF
EKFEGPLFEELQNTKSTRIVGPWAVSICLTEGKAIPNYEWPMYNVAMYNCIVTCSHLTKN
HKMEVRNKVELMGGCYVDNLVEKNTHLVTGSAKSEKYLIAAEAGLKLMRPTWIDDVWTAS
QTANVHADDEDFQKHKCLTFHNLTISSTGITNLAEKLKIEKLVTENGGNFSGKLTLATTD
VLVCSGDVVKSEKYKAARQCEHIKCVNVNWVTDSVAKGYALSHDLYKVQKITSTPTKRDK
YVNPEFSVLSAIGGFNTSSRTHIEETLSMTSSDGERVSNNKRKAKDNLDELIESLDIKKA
KKSGEYLDGCSVYLTGFGSEHIDKLNKIINLSGATRYDTFSDRVTHVIVGDSSSHEVAII
KNKNSSAVLVSLQWLIDSMEQKQPVVEDKYLVVTVDVDVNLGSPLSKKGLSLLRSNRTVT
EKEIELNNMNEEEMDNDFTPQSMAPPNESDTLGMLLNGIDGTKLIKEIQEPPKCTPQFQP
TEASTQQSSMSVTQDAETEVSRIFEHSKFLIVGFDDEEFAELKKSITDLGGDVVSKSYKG
IPDYAVVPMFNKNELHHTASEIVNELFIRECIKQEELLLSIDYYHRPVDIPDTKPVEDCV
ITISSYSGTERNFLRHLIEALGGLAQEQFARVRSENKGLFASTHLVSFEASGKKYEAALK
WGLPVISKDWLLECAKTGKKVYEGDFLLGESTAPDRREEYVENTPQKCKVPNDTAKVYVT
PSDLAGSSKSSKVLTPVNNVTPYHKRFLNSAEKFSQVTPVNKIMKQFRESNLNFSQSNKE
TKEYSIPQPWAFVKTPETPLGAFLKPDPSPNLKKQFEYWLGQFPDKPSPKSNKSTPLSEI
KRQLAEKVAKIGAYKLNFDETGEDLPEQRLQQQQLDTTDTNSEVTPNEADITPENQQIAS
RIKQIEDLLSASGSAKRQSTNFQALIPGPAGTSEYKDSQPCTVGWDFRSQEHQQAKSQLK
IFSLSGIADDTERAKMVTDLEQLGATVSNLANYDPSCTHLLCPKPARNEKSLSCMASGKW
ILHTSYLEKSIEAGHFLNEEEFEFGNPKSVGKFTISHDRDTETRTQQMHWWRKEVGRRGY
GAFNDMRAIVVANKREPIIRVIEAGGGVVINLKPPFEDTVHATHCLLEQKSVDKFTDYIP
LAKQGIYLVNTVYISDHLHNPNKDIRDCILPYFSKYYGRN
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggataaacttagaattttatttgtttgcccacaaaattatgcagatgagagtgaaagc
tctgaagtaatgctacaagcctttgaggtatgcaaacaaaatgtcaatacaaatgtcagc
tggataaaggaatcaaaatttaagtctctgactttaaacaaaactgattttgttgttttt
gaaaaatttgagggaccactatttgaagaactgcagaatacaaaaagcactaggattgtt
ggaccatgggctgtttccatctgcctaacggaaggaaaggcaatacccaactatgaatgg
cctatgtacaacgttgctatgtataattgtatagttacatgttcacatttgactaaaaac
cataaaatggaggttaggaataaagttgaattaatgggaggttgttatgtggataatcta
gtggaaaaaaatactcatttggtcactggaagtgctaaatctgaaaaatatttgattgct
gccgaggctggcttaaaactaatgcgtccaacttggatagatgacgtttggactgctagt
caaactgctaacgtccatgccgatgatgaagattttcaaaaacataaatgcttaacattt
cacaatcttacaataagttcaaccggcattacaaatttagcggagaaacttaaaattgag
aaactggtcactgaaaatggaggaaattttagcggaaaacttactttggcaacaacagac
gtattagtatgttctggagacgttgtgaagagtgaaaaatacaaagccgcccgtcagtgt
gaacatataaaatgcgtaaatgtaaactgggttacagacagtgttgccaaagggtatgca
ctttctcatgatttatataaagttcagaaaataacttcgacacctaccaaaagagataaa
tacgtcaatcctgaattttcggttttaagtgctataggaggatttaatacctcttcgaga
actcatattgaagaaacacttagtatgacatcatcagatggagaaagagtttcaaataat
aaaagaaaagctaaagataatttagacgaattaattgaaagcttggatattaagaaagct
aaaaaatcaggagagtatttagatggatgttcggtttatttaacgggttttggttctgag
cacattgacaaactcaacaaaatcataaatttgagcggtgccactcggtatgacactttt
tcagaccgagtgactcatgtcatagttggtgatagtagctcccatgaagttgctatcatt
aagaataaaaattcgtcagctgttctggtatctcttcaatggttaatagatagtatggag
caaaaacaacctgttgttgaagataaatatttagttgtaactgtagacgtagatgttaat
ttgggatcacctcttagtaaaaaaggattaagtttgctgcggtcaaatagaacagttact
gaaaaagaaattgaactgaataatatgaacgaagaagaaatggataatgacttcactcca
caaagtatggcaccaccaaatgaatctgatactttgggtatgttattaaatggaatagat
ggcacaaaattaattaaggaaattcaagaaccccccaagtgtacaccccagtttcaacca
acggaagcgtctacacaacagtcttcaatgtcagttactcaagacgcagagactgaagtt
agtcgaatttttgaacattcgaaattcttaattgttggattcgacgatgaagaatttgct
gaactaaaaaaatcaataacagatttgggaggtgatgtagtatccaaatcatataaagga
ataccagactatgctgttgtcccaatgtttaacaaaaatgagctacaccatactgcctcc
gaaatagtaaatgagctttttattagggaatgcattaagcaagaagaacttttattgagc
attgattattaccaccggcctgtcgatataccagataccaaaccggtagaagactgtgta
ataacgatcagcagctattcgggaaccgaaagaaattttctacgacacctcatcgaagca
ttaggaggattagctcaagaacagtttgctagagtgcgatcagaaaacaaaggtcttttt
gcttctacgcacttggtaagtttcgaagcgagcggaaagaaatatgaagcggctttaaaa
tggggtttacctgtaataagcaaagattggttattggaatgtgcaaaaaccggaaaaaaa
gtgtatgaaggtgattttctacttggagaatctacagcacccgataggagagaagaatat
gtagaaaatactccacaaaaatgtaaagttcccaatgacacggcaaaagtgtatgtaact
ccttcagatttagcaggttcgagcaaatcgtcgaaagtattaacgccggttaataatgtc
acaccttatcacaaaagatttttaaatagtgcagagaaatttagccaagttacaccagtg
aataaaattatgaaacaatttagggagagcaacttaaatttcagtcaaagcaataaagaa
acaaaagagtacagcataccgcaaccttgggcgtttgtaaagacgccagaaacgccgctt
ggtgcgtttttaaaaccggatccctcgcctaatttgaaaaagcagtttgaatattggctg
ggacagtttccagacaagccttctccaaaaagtaataaaagtacgcctctctctgaaata
aaacggcagttagctgaaaaagttgccaaaattggagcctataagttgaatttcgacgaa
acgggggaagaccttccagagcaacgattacaacaacaacaattggatactactgatacg
aattctgaggtcacgccaaatgaggcagatataacgccggaaaaccaacagatagcaagc
agaattaaacaaatagaagacttgcttagtgccagtgggtctgctaaaagacaaagtacg
aacttccaggcgctgatcccaggtccagctggcacgtcagaatacaaggattcacaacca
tgtacagtaggatgggattttaggtcgcaagagcatcagcaagctaaaagccaactgaaa
atattttcgctttctggaattgcagacgacacggagagggcaaagatggtaacggacctg
gagcaattaggagccacagtatctaatttagccaattatgatccgtcttgtacacatcta
ttatgtccaaaacctgctagaaatgaaaagtctttatcttgtatggcttctggaaagtgg
atcttacacacgtcttacctggagaagtcgatagaggctggacattttttgaacgaagaa
gagtttgaatttggcaatcccaaatctgtaggaaaattcactatttcgcacgatagagac
acagaaacaagaacacagcaaatgcattggtggaggaaagaggtcggcagaagaggatat
ggggcttttaatgatatgagagcgattgtcgtagcaaataaaagagaacctatcatacgg
gtaatagaagctggaggaggagttgtaattaatctaaaacccccgttcgaagatacagtt
catgcaacacattgtttattggagcaaaaaagcgtagataaattcactgattatattccc
ctagctaaacagggaatttatcttgttaatacagtgtacattagtgatcatttacataat
ccaaataaggatataagagactgcattttaccatatttttcaaaatactatggaagaaat
tga
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integrated database retrieval system
