Diabrotica virgifera virgifera (western corn rootworm): 126888329
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Entry
126888329 CDS
T09922
Name
(RefSeq) collagen alpha-1(III) chain-like isoform X1
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Motif
Pfam:
BRICHOS
Motif
Other DBs
NCBI-GeneID:
126888329
NCBI-ProteinID:
XP_050512430
EnsemblRapid:
LOC126888329
LinkDB
All DBs
Position
7:complement(110763464..110831697)
Genome browser
AA seq
1631 aa
AA seq
DB search
MRSKFFCVIFVIFYNFPLYRQDSIENNTILKQNVSTTETPIKSRLLYDYQTHAVAFKDLI
ESKCILEILSGNDSVITKWNLNGRRGSISKDFLHNELLSKRQIWRLAGDRITEFCRGFPT
YLIKNNADLTENQEIILNDLPNYIIKNRRKRTTSHYFQGRVRGQTQSQYLNFGKSDEPGK
AEAESTYEGSKAVVSGSNGMGQAQSQSLPFGCDECYGRDQDQTIELQRLPGGRIPEAIIQ
RPGGTDTIGKPGWTGGSGHGEPELTGRPGQATGPGQVGGWTGQTGRPGQVGGSGSTGGGQ
YGGGPSQPNMPSRGTGRDGWPGQSEGGGQTGGWPEQSGGWPGQTSGIRQPSGMRQPVETG
QPGIIGQPGGYGQPSGTNQPGGIGQPGGYGQPGGTGQPIETGQPGVIGQPGGYGQPNGAR
QPGGIGQPGGYGQPAGTGQPVGTGQPGIIGQPGGYGPPSGTGYPGGTLQPGGYRQPGSPG
QSGEIAPPRKIEQPGGIQQPGGIGQSGGYPGRPGEIPQTNEWPGQAGGIPQPGRWPSQTT
GQTGTNGQRGPGPVGGVDQNGIPIESWPANVGEKPGSVGDWPGQQWPSHVGGSAPGGTQP
SVPLGTTGQDQGPRQTGGWPGSTGPQPPSQVGTTGQGQGPRQTSGWPGSTDSRNPPLIRP
DQSGGSGPTIGQISKYPYGTGVFGGKLSGDYQGQQGNYGRFSGQFSGQYEAYGPQGPPRP
GELGYGQPGQLRYPEISSTPPTGRPGQAGTGTRPDQASGPGQTGGWPGQTGGWPGQTGGW
PGQTGGWPGQTGGWPGPIGSPGQIGSPGQTGGWQGQVGSPGQSGGWPGQGLGPGVTGGTN
GPISSWPSPVGSPGQGGNWPSPGIPGNVDGRPNTGWPGNLLTPGQVPGPVQSGGWPGQNG
GSLPGPGQIGTTGQTGGWAQTPPSGTAGGGIQTGNLPDQGGNVGPGGGSPTGGLPSPVGV
PGQNIGWPGQTGTQVSGYPGQNGQSGAWPGQEGGTNHPGWSGQPSGTGQLGGWPGQVGTQ
GGGQGGSTGAPGLTPGQTVGAGQDGGWPGHVGAPGQTGGGAGQVGGWPGHLGAPGQTGGW
PGQVGTPGQTGGWPSQSGPGSFVTVPGQTGGGTGNVPGLIGGPGQAVGGQISAVESDDSD
SQVQTSVQHTENGTTAEAQAQGVFGGGTAQSQVSGTYSGSGSFSASAGSDDGKRGAQTQV
SGAKEGAQSSAQGRGGVGQSQSQVVFSHETGQTSSSAQSGGITHGTQSQVQASEKGGLAD
AQSNGPGSTSSQAQIGFLPYDENDADNGTESFMGGGTAGAQSGTHSGMSQSQVQGRFKYG
VKYTGAAQAASGGTGFGKNFTKTGPFNPTEIDFKVAREKLSQKQVQRATTVSKTNSKSVP
IPDEPSPSTTVKAPINAKKLNSNSNQSNKKDYDDEYYDDYEDETEKPKTRSIITQSDHNQ
RQHIILDPLEDLDLTVHQSKGELLNEATVIQPGETVPGIPGYKIPLGFRGTVKSIANGPN
TYAIGKNSHAQSVTLSPGSGKIIYKKPFYAVTSNTHSTNGQYGYGSGYTYQPAYSPVKYQ
LKSGKTLPNFVSMTKSETGSRNLYTGKKTPSVYYTQSSTCGIFTNQCIFNAGRKLCFPKA
KTNPDGTIMGC
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcaagtttttctgtgtgatttttgtgattttttacaattttccgctgtatcga
caagattcgattgagaataacaccattcttaaacagaatgtttccacgacggagacaccc
atcaaatcaagacttttgtatgattaccaaacacatgcagtcgcctttaaggatctcata
gaatcaaaatgtattttggaaattcttagtggaaacgacagcgtcattaccaagtggaat
ttaaatggaagaagaggtagcatatcaaaagatttcctccacaacgaattattgtcaaaa
cgtcagatatggagattagctggtgaccggataactgaattttgcagagggtttcccaca
tatctcattaaaaacaatgcagacctaactgaaaaccaggaaattattcttaacgattta
ccgaactatataattaaaaaccgaagaaaaagaactacaagtcattattttcaaggacga
gtgagaggtcagacgcagtctcagtatttaaattttggaaaatcagatgaacctggaaaa
gctgaagctgaatctacttatgaaggatccaaagcagttgttagtggaagcaatggaatg
ggccaggctcaaagccaaagccttcctttcggttgtgacgaatgttatggcagagatcaa
gatcaaacaatagaactacaaagattaccgggaggaagaattccagaggcaattattcaa
agacccggtggtactgatacgataggaaaaccaggatggactggaggcagtggacacggt
gagcctgaattaactgggcgtcctggacaagctaccggtccaggacaagtaggaggatgg
acaggtcaaaccggtaggccaggtcaagtaggaggatcgggttcaacaggaggtggtcaa
tatggaggagggcctagccaaccaaatatgccatcacgaggtacaggaagagatggatgg
ccaggccaatctgaaggtggaggtcaaacaggaggctggcctgaacaaagtggtggatgg
cctggtcaaactagtggaattagacaaccaagtggaatgcgacaaccagttgaaacggga
caaccaggtataataggtcaaccaggtggatacggccagccaagtggaacaaaccaacca
ggtggaatcgggcaacctggaggatatggacaaccaggtggaacaggacaaccaattgaa
acgggacaaccaggtgtaataggtcaaccaggaggatatggacaaccaaatggggcaaga
caaccaggtggaatcggacaaccaggaggatacgggcaaccagctggaacaggacaacca
gttggaacgggccaaccgggtataataggtcaaccaggaggatatggaccaccaagtgga
acgggatacccaggtggaacattgcaaccaggagggtatagacaacctggcagccctgga
caatcaggtgaaatagcaccaccacgtaaaatagaacaaccaggtggaattcagcaacca
ggaggaatagggcaatcgggcggttacccaggaagacctggcgaaataccacaaacaaat
gaatggcctggacaagctggaggtattccacagccaggaaggtggcctagtcaaacaact
ggtcagaccgggaccaacggacaaagaggtcctggtccagttggtggagtagatcaaaat
ggaataccgatagagagctggccggccaatgtaggtgaaaaaccaggtagcgtcggggat
tggccaggtcaacaatggccaagtcacgtaggcggatctgcaccaggtggtacacagcca
tctgttccattaggtactactgggcaagatcaaggacctagacaaacaggtggatggccc
ggatcaaccggtccacagccaccttctcaagtaggtactactgggcaaggacaaggacct
agacaaacaagtggctggcccggatcaacggattcacgtaatcctccacttattcgtcca
gatcagtctggtggttccggacctactataggacaaatatctaaatatccatatggtact
ggagtatttggaggtaaattaagtggagattatcaagggcagcaaggtaactacggtaga
ttttcaggtcaattttctggccaatacgaagcttatggacctcaaggtccaccgcgacca
ggtgagttaggatacggacaaccaggtcaattaagatatccagaaatttcaagtacacca
ccaacaggtagacctggacaagcaggaaccggtactagacctgatcaagcaagtggtcca
ggacaaacaggtggctggccaggacaaacaggtggttggccaggacaaacaggtggttgg
ccaggacaaacaggtggttggccaggacaaacaggtggttggccaggaccaataggaagt
ccaggacaaataggaagcccaggacaaacgggtggttggcaaggacaggtaggaagtcca
gggcaaagtggtggttggcctggtcagggactaggtccaggagttacaggaggtacaaac
ggaccaattagtagttggccaagtccagttggaagtcccggacaaggtggaaattggcct
agcccaggcatcccgggaaatgttgatgggagaccaaacactggctggcccggaaattta
ttaaccccaggacaagtacccggacctgtacaatccggaggatggcctggtcaaaatggt
ggtagtttgcctgggccagggcagataggaactacaggacaaacaggaggatgggctcaa
actccaccttcgggcactgctggaggtggaattcaaacaggtaatttgcccgaccaagga
ggaaatgtaggtcctggtgggggtagcccaactggcggtttgcctagtccagtaggtgtc
ccaggacaaaatattggttggcccggtcaaactggaactcaagtatctggttatcctggt
caaaatggacaaagtggtgcttggcctggacaagaaggtggaacaaatcaccctggctgg
tcaggtcaaccaagtggaacaggtcaattaggtggttggcctggacaagtaggaactcaa
gggggtggtcaaggtggcagcactggagcaccaggtctaacgcctgggcaaacagtaggg
gccggtcaagatggtggatggcctggtcacgtaggagctccaggacaaactggtggtgga
gccggtcaagttggcggatggcctggtcacctaggagcaccaggacaaactggcggttgg
cctggtcaggtaggaacaccaggtcaaacaggaggctggcctagtcaaagtggtcctggt
tcttttgtaacagtacctggtcagacggggggaggaactggaaatgtacctggactaatc
ggtggacccggccaagcagttggtggtcaaatttccgccgtagaatcagatgattcagat
tcacaagtgcaaacttccgttcaacacacagaaaacggaacaacggctgaagctcaagca
caaggagtctttggcggaggtactgcacagtctcaagtttctggaacctattctggatct
ggttcgtttagcgcttctgcggggtcggatgatggtaaaagaggtgcccaaactcaggta
tctggtgcaaaagagggagctcaaagctctgcccagggaagaggcggtgtaggtcaatca
cagtcacaagttgttttctcgcatgaaactggccaaaccagttcaagtgcacaaagtggt
ggtattacccacggtacacaatcgcaagtacaagcatcagaaaaaggaggcctagctgac
gcacaatcgaatggccctggaagtacgtcgtctcaagctcaaattggatttttaccgtat
gacgaaaatgacgctgataacggcacagaatcatttatgggaggaggtactgctggagca
caaagtggcactcattccggaatgtcccaatctcaagttcaaggaagatttaagtatgga
gtaaaatatacaggagctgcacaagctgcttccggaggaactggatttggtaaaaatttt
actaaaactggcccgtttaatccaacagaaattgattttaaggttgcaagagagaaactg
tcacagaaacaagttcaacgtgcaacaacagtatcaaaaactaattcaaaaagtgtgccc
attcctgatgaacccagtccatccacaacggtgaaagcacccataaatgcaaaaaaatta
aattcaaattcaaaccaatcaaataaaaaagattatgatgacgagtattacgacgactat
gaagatgaaactgaaaaaccaaaaaccagaagcattataacacaatctgatcacaatcaa
agacaacacattattttggatccattggaagatctagatctaactgtacatcaaagtaaa
ggtgaactacttaatgaggctaccgttattcaaccaggtgaaaccgttcctggtattcca
ggttataaaataccccttggatttagaggaacagtaaaatcaatagcaaatggcccaaat
acgtacgctattggtaaaaattcccatgctcaaagcgttactctttctcctggcagcgga
aaaattatttacaaaaaaccattttatgcagttacgtcaaatactcattcaacaaatggt
caatatggttatggatctggatatacgtatcaacctgcttattcacctgtcaagtaccaa
ttaaaaagtggcaaaacattaccaaattttgtttctatgactaaatccgagacaggatca
agaaatctatatactggaaagaaaacaccaagcgtgtattatacccaatcgtctacatgt
ggtatttttaccaatcaatgtatatttaatgcgggtcgaaaattatgttttcctaaagct
aaaacaaaccccgatggcaccataatggggtgctga
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