Diabrotica virgifera virgifera (western corn rootworm): 126888732
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Entry
126888732 CDS
T09922
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126888732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126888732
03012 Translation factors [BR:
dvv03012
]
126888732
Enzymes [BR:
dvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126888732
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126888732
Translation factors [BR:
dvv03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126888732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
DEAD
HA2_N
HA2_C
AAA_19
ResIII
nSTAND3
AAA_22
ATPase
NPHP3_N
Rad17
PhoH
AAA_7
AAA_23
TsaE
AAA_16
NB-ARC
Sigma54_activat
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126888732
NCBI-ProteinID:
XP_050513088
LinkDB
All DBs
Position
7:complement(133245168..133397465)
Genome browser
AA seq
957 aa
AA seq
DB search
MPKRKREYNFKSTKGGKNNGENSQSEFQRLRHPRGLKGRQIGLWYAQHNKLRRNTQTQPP
QRPHEKPLGKIIISETKVRQIREFLLTTSLESEFVNDINIEESAFKMSYLSNIRGSIIDK
LSKCCTTAPHNSDLDNRLYDEYQHMVNIPSYKIMKVNREKLPAYSMKEQLINMINKNQVV
LISGETGCGKTTQIGQFILDSFIENRMGTRCQIICTQPRRISAIAVAERVAQERVEELGQ
SVGYQIRLEKKLPRDTASICFCTTGVVLKKMEDDPSLSRVSHLIIDEIHERAIPSDFLLT
LLKEVLKKRTNLKVILMSATLNAEEFSKYFDNCPHICIPGFTFPVQQYFLEDVLQVTKFT
FFSEKSKRDFKYVRHQSEEEREFDKYILPQIKIKAAEKQYDREVYEQLCNPKSEDLNLNL
VLALLVKICQKDAKAILIFLPGLTDISDLNKSIKNSKLFDPNKYLIIPLHSKMPTVDQKQ
IFNPAPHGMRKIIISTNIAETSITIDDVTHVIDCGKIKMSDFDVATNTETLKTRWVSVAN
ADQRKGRAGRVQAGTCYHLFSTYRKKLLDLYQKPEILRTRLDGTILQAKILQLGKVNEFF
TKLMNPPSAESLSLALDLLKRLNALDESENLTPLGYHLAKLPMSPQIGKMVLFGAIFSCL
DPILSIATSLDFKDAFQIPLGKEKQADAKKRELGKGFMSDHIVLHIVMEKYEKMNNTSFC
YDYFLSSYILKLLKKLKEQFMGYLLELKFVSDLNPKNVVNNVNSGNISLVKAVVCAGLFP
NVAIAKQDSRGIVRHLYSPDRQTRYEFHLKSILTVNQPFPSPLIVYYSKLKTSKEYIHDA
TMIYPLPLIFFGDQYKALTESNNFFITVSNYLRFSSNVFTYQLITELRNKMNWFLEYKIT
SPGVVDWTNPSDNLNILQAVVELITAEDIGQIDSFDDEDWDNQTASLEQYPPYFYNL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagaaaaagagaatataattttaaatctacaaaaggtggtaagaataatgga
gaaaattctcaatcagaatttcaacgtttacgccatccacgtggacttaaaggcagacaa
attggtttatggtacgcccaacataacaagcttaggcggaatacacaaacacagcctcca
caacgtccacatgaaaaacccttaggaaaaattatcatttctgaaactaaagtaagacaa
attcgagaatttttactaactacttcattagagagcgaatttgtcaatgacataaatata
gaagaatctgcatttaagatgtcctatttatcaaatataagaggtagtataatagacaaa
ctttctaagtgttgtacaactgctccgcataattctgatttagataatagactatatgat
gaataccagcatatggtaaatatcccttcatataagataatgaaagtgaaccgcgaaaag
cttcctgcttattctatgaaagaacagctgataaatatgattaataaaaatcaagtggta
ttgattagtggtgaaacgggatgtggcaaaactacacaaattggtcagtttattttagat
agttttattgaaaatagaatgggaacaagatgtcagattatctgcacacaacccagaagg
attagtgctattgcagtagctgaaagagttgcccaagaacgtgttgaggaattaggtcaa
agtgttgggtaccaaataagacttgaaaagaagttaccaagagataccgcctccatatgt
ttttgtacaactggtgtagtattaaaaaaaatggaagatgatccttctttgtctagagtt
tcacatcttattatcgatgaaattcacgaacgtgcaatcccatctgattttttacttaca
ctcctgaaagaagtactaaagaagcggactaatttaaaagtgattcttatgagcgccact
ttaaatgccgaggagttttccaagtattttgacaattgtccccatatatgtattcccggt
tttacttttccagtccagcaatactttttagaagatgtactacaagtaactaaattcaca
tttttttcagaaaagtcaaaaagagatttcaaatatgtaagacatcagagtgaagaagag
cgtgaatttgataaatatattttgcctcaaataaaaataaaagctgccgaaaaacaatat
gatagagaagtgtatgaacaactatgtaaccctaaaagcgaagatttaaatttgaaccta
gtattagcattacttgtcaaaatttgtcaaaaagatgcaaaggcaattttaatattccta
ccaggcctgactgatatctctgatcttaataagtctattaaaaactcaaagctttttgac
ccaaataaatatctgataattcctttacattcgaagatgccgacagtagatcagaaacaa
attttcaatcctgccccacacggaatgagaaagattattatctctaccaacattgcagaa
acttctattacaatagatgatgttacacatgttatagattgtggcaaaattaaaatgtct
gattttgatgtagccactaatacggaaacactgaaaacaagatgggtaagtgtagcaaat
gcagatcaaagaaagggtcgtgccggtagagtacaggcaggtacatgttatcatctattc
agtacatataggaaaaagcttttggatttataccagaaacctgaaattcttcgcacaaga
ttagacggtactatcttacaagcaaaaatattacaacttggtaaagttaatgaattcttt
actaaattaatgaatcctccaagtgccgaatctttatcgctagcactggatctacttaaa
agattaaacgctttagacgagagtgaaaatttaacgccgctagggtaccatctagcaaaa
ttacccatgtctccgcagataggaaaaatggtattatttggagctatattcagctgtttg
gatccaattctgtccattgctacttctttagattttaaagacgcttttcagattccatta
ggaaaggaaaaacaagcagatgctaaaaaaagagaactgggaaaaggatttatgagtgat
cacattgttttgcacatagtaatggaaaaatatgaaaaaatgaataatacatctttttgt
tatgattattttttaagttcttatattttaaagctactaaagaagctgaaagaacaattt
atgggatatcttcttgaattaaaatttgtatcagatttgaatccaaaaaatgtagtcaat
aatgtaaattcgggaaatatcagtttagtaaaagctgttgtttgcgctggtttattccca
aatgttgctatcgctaaacaagatagcaggggaatagttaggcatctgtattctccagac
agacaaacaagatacgaattccatttgaaatcaatacttactgtaaatcaacctttccca
tcgcctttaatagtatattattcaaaattaaaaactagcaaagaatatattcatgacgca
acaatgatatatcctttacctcttattttctttggagatcagtataaagcattaaccgaa
tctaataattttttcataacagtttccaattatttaagattttctagcaacgttttcaca
tatcagctgataacagagctaagaaataaaatgaattggttcttagagtataaaattact
tctccaggtgttgtagactggactaatcctagtgacaatcttaatattttacaagctgtt
gtcgaacttataactgctgaagatataggacaaattgattcatttgatgatgaagactgg
gataatcaaacagcgagtttagaacaataccctccatatttttacaatttgtga
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