Diabrotica virgifera virgifera (western corn rootworm): 126888797
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Entry
126888797 CDS
T09922
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv04140
Autophagy - animal
dvv04142
Lysosome biogenesis
dvv04145
Phagocytosis
dvv04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
126888797
04142 Lysosome biogenesis
126888797
04140 Autophagy - animal
126888797
04148 Efferocytosis
126888797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dvv04131
]
126888797
Membrane trafficking [BR:
dvv04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
126888797
Hops complex
126888797
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
zf-C3HC4_2
Clathrin
zf-C3HC4
zf-RING_5
zf-RING_UBOX
zf-C3H2C3
zf-RING_2
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
126888797
NCBI-ProteinID:
XP_050513130
UniProt:
A0ABM5KSG5
LinkDB
All DBs
Position
7:13411914..13437136
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AA seq
1006 aa
AA seq
DB search
MTSMFDQFEQAAMNTKHTLDSELCTAGFINMSLEPELPIFSKSKKDFSPSEKITHVAIAN
KHLVIFMSNCVLFRMNLNNPQQTSEISLSKYTTTSKLTNLFLDPTGNHLLLTFLSKVPDG
GPELLYLSKKLDKVRTTPKFRGNDFTAVAWNPLNESESTTGPILLGTSKGLIFETEIALE
GDKFFASSFSSSLEQYWRQLPNYLPLYGNKDDDGLVFDIGKGQNNPIQGLEFFRIPGTDK
FVIIVATPSKLYYFSSSVNVNEKPVLQQVFNKYLNVPEAQTFMECHSDKKFSKLQLWSEN
LTTPNSFAWVTSEGISFCQIDVAIDSIKSIESKTNLIPYPKALYDDSTPQKYPIAVALTQ
FHILLAYTDSVKGVCLFNQEVVYEDNYNEAFGRLVNLVKDVRTGDIWAITENSVFRFRVT
REERNIWQIFCNNGEFELAKKYSRGNLQCYNHVLIKEADKLFADQKYELSAQRYAETESS
LEEICLKFIEANQHNALKLFLRCKLDTLKPQDKTQITMIVIWVMELYLVKLEQMRLAGLE
QTATYADLQKEFDVFLALDEISNCIKNNKGTVYNLMSSHGDKNNVLKLTILNKNFEQIIQ
QHIFKNNFHDALDVLKSQKNYELYYQFTPILIQEIPKYMIKVLIEQGRKLIPLKLLPAMV
TCSSELHAREIIKYLEFCIDKLKNTDKAIHNFLISLYAKYDSDMLMKYLNKCDAEMLKYM
NTQGQKLTMVNFDIHYALRLCHEHDHKRACVQLYGLLGMWKAAVDLALTIDMDLAKKMAN
MSPEDDVELKKKLWLKIAEYVFKDKEDVGEMIDFLRQCDLIKIEDILPFFPDFVTIDYFK
DAICNSLKEYNQNIQNLKDEMEEATKSAEQVREDIETFRNHRTIINTTDTCEVCNKTLLI
KPFYMFPCHHRFHSDCLLAELSPFLGPAKRYRLMDLDKQLQSYNNQVNIDTISTGSAGLS
AKDQIKLEIDNILASECLYCGENMIRNIDKPFIEDHEYETIMKEWE
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgacttctatgtttgatcagtttgaacaagcagctatgaatactaaacacacactggat
tcagaactgtgtacagcaggttttataaacatgtctttggaacctgagctgccgatattt
tccaaaagcaagaaggatttttcgccttcagaaaaaataactcatgtagccattgctaac
aaacatttggtgatttttatgtcaaattgtgtgctatttcgtatgaatctgaataatcca
cagcaaacatcagagatctcactatcaaagtatacaaccacctctaagcttaccaatctg
tttttggatccaactggaaaccatttacttttaacattcctttccaaagtacctgatggg
ggtccagagctactgtatctatcaaagaagctagataaagtaaggactacacctaaattt
agaggcaacgactttacagcagtagcttggaatcctctgaatgaatctgagagtaccact
ggacctattttgttaggtacttctaaggggttaatatttgaaactgaaattgccttggaa
ggggacaagttttttgcatccagtttttcttctagcttggaacaatattggagacagcta
ccaaattatttgccgctgtatggaaacaaggatgatgatggtttggtttttgacattgga
aaagggcaaaacaacccaatacaaggactagaatttttcagaattcctggcactgacaag
tttgtcataattgtagccaccccttcaaaactatattacttttccagttcagttaatgtt
aacgaaaagccagtgttacagcaagttttcaacaaatacttaaatgtgcctgaagctcag
acttttatggaatgtcatagcgacaaaaagttttcaaaactgcaattgtggtctgaaaat
ttaaccacacctaattcttttgcttgggtaaccagcgagggaatatcgttttgtcagatt
gacgttgccatagactccataaaatcgattgagtcaaaaacaaacttgatcccatacccc
aaagcactttatgatgattcaactccacaaaaataccccatagcagtggctctaacccag
ttccacattctcctagcctatacagactcagtgaaaggagtatgtctattcaaccaggag
gtagtgtatgaagacaactacaacgaggcatttggtagactggtaaatttggtgaaagat
gtgagaacaggtgatatttgggctataacagaaaattctgtgtttaggtttagagtgact
cgcgaagagaggaatatatggcagatattttgtaataatggagagttcgaattggctaag
aagtattctagggggaacttgcaatgctataaccacgttttgataaaagaagctgataag
ttgtttgcagatcagaaatatgagctcagtgcccaaagatatgcagagactgaaagtagc
ttagaggaaatatgcctgaagttcattgaagctaaccagcataatgctttgaagctgttt
ttgagatgcaaattggacacactaaaaccccaagataagacccaaatcactatgatagtc
atttgggtcatggaactgtatttggtaaaactggaacagatgcgtctagcagggttagaa
caaacggcaacatatgcagacttgcagaaggagttcgatgtatttttagccttagacgaa
atctcaaattgtatcaaaaacaataagggcactgtttataatctaatgagcagtcatggg
gataaaaataacgtcttaaaattgactatactcaacaaaaactttgaacagataattcag
caacacatcttcaaaaacaacttccatgacgctctggacgtgctcaaaagccagaagaac
tacgagctttactatcagttcaccccaattttgattcaagaaataccgaaatacatgatc
aaggtactaatagagcaaggcaggaagctgataccgttgaagctcctaccagcgatggta
acctgtagcagcgagctgcacgctagagaaatcattaaatatctggagttttgtattgac
aaactgaagaataccgacaaagctatacataacttcttaatttcgttatatgccaaatac
gactcagacatgttgatgaagtatttgaacaaatgcgatgctgagatgttgaaatacatg
aatacacagggccagaagctcacgatggtaaattttgacatacactacgccttaagactg
tgccacgagcatgaccataaaagagcttgtgttcaattgtatggcttgctgggaatgtgg
aaagctgctgtcgacttggcgctgaccatcgatatggacttagctaaaaagatggctaat
atgtcacccgaagacgatgtcgagttgaagaaaaagctttggctaaaaatagccgaatac
gtcttcaaagacaaagaagatgtaggagagatgattgacttcttaagacagtgtgatctc
atcaaaatagaagatattttgcccttctttccagactttgttaccattgactactttaaa
gacgccatatgtaattccctcaaggagtacaaccagaacatccagaacttgaaggacgaa
atggaggaagcgactaagtctgcagagcaggttagagaagacattgaaacgtttagaaac
catcgtacgatcatcaatactaccgatacttgcgaagtttgcaataaaacgttgttaata
aaacctttttacatgttcccttgccatcataggttccatagtgactgccttctagctgaa
ctctcaccatttctgggtccagcaaaaagatatagactaatggatttggataagcagttg
caatcttacaataaccaagtaaatattgacactataagcaccggttcggcaggattgtcc
gccaaagatcaaatcaagctagaaatcgataatattctagcatccgagtgtctgtattgt
ggagagaatatgattagaaatatagataagccgtttatcgaagatcacgagtatgaaacg
ataatgaaagagtgggaataa
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integrated database retrieval system
