Diabrotica virgifera virgifera (western corn rootworm): 126890588
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Entry
126890588 CDS
T09922
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03013
Nucleocytoplasmic transport
dvv03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126890588
03015 mRNA surveillance pathway
126890588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dvv03019
]
126890588
Messenger RNA biogenesis [BR:
dvv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126890588
mRNA cycle factors
P-body specific factors
126890588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
126890588
NCBI-ProteinID:
XP_050515611
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Position
8:complement(130207914..130296787)
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AA seq
1130 aa
AA seq
DB search
MTINENTEDDPEQVMGSNSDLAESERAVLLTFIQEIQEKLAQKKELRAKNTNASSNRPSD
SSFSKLDSSLKKNTAFVKKIKNFSSSCVEGYLKDMAGLNLSKYISEIAAAIVDSKLKMSD
APAAVKLCSVLHQTYADFSQHLFENWQKILTIKVGDKIPNPSKLRVDLRFYADLLQAGIF
SNKNALSLLGSVLTTLINMDKEEHFNIAIILSFCRHCGDDYAGLVPRKMKEFSTKYNMEI
PKSTFLPSEKQQNVRALLKDYYVSLCKHLVKDHIEMQNFERQNMRILQTKGELSQERKEK
LEQLQSAYEKLLANTQNYSDILDEDMPTLRTQNLPKGDENMIVTGSGTDLEEGAGNLENI
WCDIETQKFYCDLPELTVFLPTAFLNKGQTPPPAETAVTEEVLDSDLPVDELEDDSKAEE
PPIAEEEIEDPTSTTASNKIVLEAFLNNLPNCVNREMIDNAAIDFLVTLNNKHNRKKLVR
SLFGVNRTRLDLLPFYARFVAILHPAVPEVGSELCQMLRQDFKYHVRKKDQINIESKIKV
ARFIGELVKFKLYSKIEALYCLKVLLHDFSHHHIEMACNLLEVCGRFLYCSPDSYQRTKV
YLEQMMRKKAVMALDSRYVTQIENAYYYVNPPEVVTITKKERPVMHQFIRKLLYQDLQKN
NTDKIMRLMRKLDWASPEIAAYAVKCLTGAQNLKYFNIRCLANLLAGLVAYQEEIGTKVV
DGVLEDIRLGMEANLPKYNQRRIAQVKYLGELYNYRMVESSDVFKVLYSIISFGVSMDPT
EPSPLDPPHNLFRIRLASVLLETCGTYFSSGSSKRKLDYYLAFLQAYYWFKKKMWQEGFP
PILEHIFKDTLTTLRPKLKLCQSYDEAIEELNNIKVALGIEKLLEIDHGNVEEDGLDTIT
ETDNEEVAEDETSEGVTGPVTDDTATEDETVDNTQGSDDEGENMTSEAEQDPVSESLAIP
KGPKKVDCAEDDEFLNALDKMVSENIQERMKEPVKAGNIDISVPVVLKSNVKRTYEQLQE
TPDESTQGKIGFVLMVRKGNKQQYKQFEADVDSELAQNLRDQEQAQREEKEKVKRLTLNI
TERFEEEDYQEMMQQQNKPITQNLNRERKKYQHLKGTPDADLIFGPKKVR
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgactattaatgagaatactgaagatgacccagaacaagttatgggatcaaattcagat
ttagctgaaagtgaaagagctgttctattaacatttattcaagagatccaagaaaaactt
gctcagaagaaagaactaagagctaaaaacacaaatgcctctagcaacagacctagtgac
tcatcttttagtaaactagattcaagtttaaagaaaaatacagcatttgttaaaaaaatt
aaaaacttttcttcctcatgtgtagaaggctaccttaaggatatggctggtttgaattta
tctaaatacatatcagagattgcagcagcaatagttgactcaaaacttaaaatgagtgat
gctccagctgcagtaaagctatgtagtgttttacaccaaacctatgcagatttttcacaa
catcttttcgagaactggcagaaaattttaactattaaggttggagacaaaattcccaac
cccagtaaattacgtgtcgatctaagattttatgctgatctgttacaagcaggaatattt
tcaaataagaatgctctatcactactgggctcggttttaacaactttgattaacatggat
aaagaggaacatttcaatattgctattattttgagcttttgtagacattgtggagatgat
tatgcaggacttgtacctcgaaagatgaaagaattttctacaaaatacaacatggaaata
ccaaaaagtacctttttaccttctgagaagcagcaaaacgttagagctttactaaaagac
tactacgtttcactttgtaaacatttggtaaaggatcacatcgaaatgcaaaattttgag
agacaaaatatgagaatacttcagaccaaaggggagttgagtcaagaaaggaaggaaaaa
cttgaacaattgcaatctgcatatgaaaagttgttagctaatactcaaaattattcagat
atattagatgaagatatgcctacattaagaacacaaaacttgccaaagggggatgaaaac
atgatcgtaactggctcaggtactgatttagaagaaggtgccggtaatctagaaaatata
tggtgtgatatagaaactcaaaagttttactgtgatttgcctgaactgactgtatttctt
cctacggcctttttaaacaaagggcaaactcctcctccagctgaaaccgccgtgacggaa
gaagttttggatagcgatttaccggtagacgagttggaagacgatagtaaagcagaagaa
ccccctatcgccgaggaagaaatagaggatccaacttcaacaactgccagcaataaaata
gtcttagaagcatttttaaacaatttacccaactgtgtgaacagagaaatgatcgataat
gcagcaatagattttttggttacattgaacaacaaacataatcgtaagaaattggttcgt
agtttgtttggtgttaaccgtaccagattagatctgcttccgttttatgcacggttcgtt
gctattttgcatcctgcagttcccgaagtaggaagcgagctgtgtcaaatgttacgacag
gattttaagtatcatgttaggaaaaaagatcagataaacatagaatcgaaaattaaagtc
gctaggtttataggtgaactcgtcaaatttaaattatattctaaaatagaagctctctac
tgcctgaaagttctacttcatgatttttctcatcatcacatagaaatggcttgtaatttg
ttggaagtatgtggaagattcttatactgcagtccagactcttaccaaagaactaaagtg
tatctagaacaaatgatgagaaaaaaggcagttatggcattggattcgagatacgtgacg
cagattgaaaatgcttactattatgttaatccccctgaagtcgttacaattacgaaaaaa
gaaagacccgtgatgcatcaatttataagaaagctactctatcaggatttacagaagaat
aatactgacaaaattatgagacttatgagaaaattagattgggccagtccagaaatcgct
gcttatgctgtaaaatgtttgacaggtgctcagaatcttaaatatttcaatatcaggtgc
ttagcaaatctattggcaggtctagttgcctatcaagaagagattggaactaaagttgta
gatggtgttttagaagatattagactaggtatggaagcaaatcttcccaagtacaaccaa
agacgaatagctcaagtaaaatatcttggggaattatacaattatagaatggtggaaagt
tccgatgtttttaaagtcctatattcaataatatcatttggagtttcaatggaccctact
gagccttcgccgcttgatccgccccataatttatttagaattcggctggcctccgtactt
ttagaaacctgcggaacatattttagtagtggtagcagtaaacggaagcttgactactat
ttagcatttttacaagcctattactggtttaaaaagaaaatgtggcaagagggattccct
ccaatactcgaacatatctttaaagataccctaactacattgaggccaaaactgaaactc
tgtcaaagttacgacgaggccatcgaagaattaaacaatatcaaagtggcgttaggtata
gaaaaattactggagattgatcatggaaatgtagaagaagatggattggacacaataaca
gaaactgataacgaagaagtagcagaggatgagacgtccgaaggcgtaacgggtcctgtg
actgacgacactgccacggaagatgaaacagttgataacactcaaggatcggacgatgaa
ggtgaaaatatgaccagtgaagctgaacaagatccagtttcagaatctttggcgatacct
aaaggccccaaaaaggttgactgtgctgaagatgatgaatttctaaacgctcttgataaa
atggtttcggaaaatatccaggagcgcatgaaggagcctgtgaaagccggaaatattgac
atttctgttccagttgttcttaagtctaacgttaaacgaacttacgaacagttacaggaa
actccagatgaaagcacccagggaaaaattgggttcgtacttatggtacgtaaaggaaac
aaacaacaatataaacagtttgaagctgatgttgattcagaattagcccaaaatcttaga
gaccaagagcaggctcagagggaagagaaggagaaagttaaacgtcttacgttaaacata
acagagagattcgaagaagaagactatcaagaaatgatgcaacaacaaaacaagcctatt
acccaaaatttaaatcgagaaagaaaaaaatatcaacacctgaaaggtaccccagatgca
gacttaatattcggtcctaaaaaagttcggtaa
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