Diabrotica virgifera virgifera (western corn rootworm): 126890749
Help
Entry
126890749 CDS
T09922
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
dvv
Diabrotica virgifera virgifera (western corn rootworm)
Pathway
dvv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dvv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126890749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dvv03041
]
126890749
Enzymes [BR:
dvv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126890749
Spliceosome [BR:
dvv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
126890749
Complex C
U4/U6.U5 tri-SnRNP related factors
126890749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
Flavi_DEAD
AAA_30
nSTAND3
SLFN-g3_helicase
Cas3-like_C_2
ATPase
Reprolysin
Motif
Other DBs
NCBI-GeneID:
126890749
NCBI-ProteinID:
XP_050515877
LinkDB
All DBs
Position
8:complement(30095933..30119466)
Genome browser
AA seq
890 aa
AA seq
DB search
MDRPSTSKRNVFDSDSDSVDSTEEARRRDLKERDEFANRLKKRDEERTRNVASTSDKRAY
EEAAKRLKLDNAEKEKLIPALRVASRRKYLEKRKEDKLQELEADIADDEYLFEEDVLTER
EKKDRVHKKELLKLAQEHEKARELERVQRYHMPRDLGKDSTADYIEVDDLEKVPQSEQKK
WEKDQMASAVFKFGAKDGIKKEEYELVLEDQIQFIQALQMPGVSDKKEPELTETEKKKLT
IEETKKSLPIYPFKDDLIQAIREHQVLIIEGETGSGKTTQIPQYLYEAGFCEDGKKIGCT
QPRRVAAMSVAARVAQEMSVKLGNEVGYAIRFEDCTSERTVIKYMTDGTLHREFLSEPDL
ASYSVMIIDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATLDVTKFSDFFDDAPVYQ
IPGRRFPVDIYYTKAPEADYVDACVVSVLQIHVTQPLGDILVFLTGQDEIETCQELLQDK
VRRLGSKVKELLILPLYANLPSDMQGKIFEPTPPGARKVVLATNIAETSLTIDNIIYVID
PGFAKQNHFNSRTGMESLMVVPISKASANQRAGRAGRVAAGKCFRLYTAWSYKHELEDNT
IPEIQRINLGNAVLMLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHHGELTKL
GRRMAELPVDPMMAKMILASEKYKCSEEIVTIGAMLSVNGAIFYRPKDKIIHADTARKNF
SHLAGDHLSLLNVYNQWRDSDYSLQWCYENFIQYRSMKRARDVREQLVNLMTRVEIEIVS
NVSETVDIRKAITSGYFYHIARFSKGGSYKTVKHNQSVTIHPNSALFESLPRWVLYHELV
FTSKEFMRQVIEIESKWLLEVAPHYYKQKELEDPTNKKMPKTVGRSTRTD
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggatcgaccaagtacaagtaagcgaaatgtctttgactccgattcagatagtgtcgac
agcactgaagaagctcgccgaagagatctgaaggaaagagatgaattcgcaaataggctc
aaaaaacgcgatgaagaacgtactagaaacgttgccagtacttctgataagcgcgcttat
gaagaggctgctaaaagacttaaattggacaatgcagaaaaagagaaacttattcctgca
ctcagagttgcttccaggaggaagtatttggagaagagaaaggaggacaaactacaagaa
ttggaagctgatattgccgatgatgagtacctttttgaggaagatgttttgactgaaaga
gagaaaaaagatcgtgtacacaagaaagagctgttaaaattggcgcaggaacatgaaaag
gccagggaacttgagcgggttcaaaggtatcacatgcccagagatttgggcaaggactcc
actgctgattacattgaagttgatgacttggagaaggtaccacaatctgaacagaagaaa
tgggaaaaagatcagatggcctcggcagtgtttaagtttggagcaaaagatgggattaaa
aaagaagagtatgagttagtgttagaagatcaaattcagtttatacaagcactacaaatg
ccaggagtgtctgataagaaagaacccgaactaacggaaacagaaaagaaaaaacttact
atagaagaaacaaagaaaagccttccgatatacccttttaaagacgacttaatacaggcc
attagggaacaccaagttttgattatcgaaggtgaaaccggctctggcaaaaccacacaa
attccacagtatttatacgaagctggtttctgtgaagatgggaagaagattggttgtact
cagccacgaagagtagcagccatgtcagtagctgctagagtagcacaagaaatgagtgtt
aaattaggtaacgaagtaggatatgccatcagatttgaggattgcacctctgaaaggaca
gttattaaatacatgacagatggtaccttacacagagagttcctatcagaaccagattta
gcgtcttatagtgttatgattattgacgaagctcatgaaaggactttacacactgacata
ttgtttggtttagttaaagatatagctagatttagaccagacttaaagctcttaatatcc
agtgcaacacttgacgtaacaaaattttctgatttttttgacgatgctcctgtttaccaa
ataccaggaagaaggtttccagttgacatttattacacgaaagctcctgaagccgactac
gtcgatgcttgtgtagtatcagtacttcagattcatgtgacacaacccttgggcgacata
ctagtatttttgactggacaagacgaaatagaaacgtgccaagaacttttacaagataaa
gttcgtaggctagggtcaaaagttaaagaattacttatattgccactatatgcaaattta
cccagcgatatgcaaggtaaaatttttgaaccgacgcctccaggtgctagaaaagttgtt
ttggccacaaatatagctgaaacgtctttaacaatagacaatattatatacgttatagat
cctgggtttgcgaaacaaaatcatttcaattcgagaacagggatggagagtttgatggta
gtaccaatatccaaagcttctgcaaaccagagagctggcagagctggtagagtagcagct
ggaaaatgttttaggctatacactgcttggtcttataaacatgagctagaggacaatact
ataccggaaatccagcggataaatttaggaaacgccgtactcatgttgaaggcgctagga
ataaatgatttggtacattttgattttttggatccacctcctcatgagactttggtgtta
gcattagaacaattatacgctttgggggctttaaatcatcacggagaattgaccaaattg
ggcagaagaatggccgagttaccggtggatcccatgatggccaagatgatattagcttcg
gaaaaatacaaatgctctgaagaaatagtcaccataggagccatgttatcagtaaatggt
gccatattttaccgaccaaaggataaaataattcacgctgatactgctcgaaaaaatttc
agtcacttagcaggagatcatctaagtcttctaaatgtttataatcaatggagggattct
gattactccctacagtggtgttacgaaaatttcatacaatacagatcaatgaagcgagcc
cgagacgtcagggaacagctggttaatttgatgacaagagtagaaatagaaatcgtttcc
aacgtttctgaaaccgtggacatccgcaaggctatcacctccggttatttctaccacata
gctagattttccaaagggggaagttacaagacggtgaagcacaaccaaagtgtcaccatc
caccccaacagtgcacttttcgaatcattacctaggtgggttctctaccacgaattagtt
tttacttcaaaggagttcatgaggcaagtgatagagatcgagagtaaatggttattggag
gtagctccacattattataagcaaaaggaattagaagatccgacgaataaaaagatgccg
aaaacggtaggcaggagtaccagaactgattag
DBGET
integrated database retrieval system
