Desulfosarcina widdelii: DSCW_09990
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Entry
DSCW_09990 CDS
T06303
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSCW_09990 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_09990 (uvrB)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSCW_09990 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DSCW_09990 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_19
AAA_30
AAA_22
AAA_16
Spectrin_1st_PEPL
SU10_MCP
DUF87
UB2H
ATR13
Motif
Other DBs
NCBI-ProteinID:
BBO73582
UniProt:
A0A5K7YUX4
LinkDB
All DBs
Position
complement(1030584..1032578)
Genome browser
AA seq
664 aa
AA seq
DB search
MPAFKIVSEFTPCGDQPTAIDAISKKVAEGAKSQVLLGVTGSGKTFTVANIIARVNRPAL
ILAPNKTLAAQLYNEFRQLFPENAVEYFVSYYDYYQPEAYIPTTDTYIQKDSSINEMIDK
MRHSATRSVLSRTDVIVVASVSCIFGLGAPEDYLAMRIDIEAGMELPRERLLYQLVSIHY
QRNDMDFHRGVFRVRGDRVEIFPAYEEERAIRVDYFGDEIESIQEFDPLRGTTLRSMEKA
SLFPASHYVTGKAKLDRATKTVVEEMKQRVEFFRQENRLIEAQRIEERTLFDLEMIQEIG
YCNGIENYSRHLTGRRPGQPPPTLLDYFPEDFLIFVDESHIAVPQIRAMYKGDRSRKETL
VNYGFRLPSALDNRPLKFEEWSARIHQIVYVSATPADYELKSADDRVVEQIVRPTGLIDP
VVHVRGARNQVDDLYQEITTRQQCGERILVTTLTKRMAEDLTEYYTDLGLSVRYLHSDIS
TMERMDIIRDLRMGKFDALIGINLLREGLDIPEVSLVAILDADKEGFLRSARSLIQTFGR
AARNVNGTVVLYADRVTAAMRQAMEETDRRRAIQEAYNEEHRITPRTVHKNITDIFDMAY
EIPEAEPATVAESVVDFESGKEVEKLIETLENDMQAAAKKLAFEEAAKIRDRIRSLKKRL
LFET
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgccagcctttaaaatcgtatccgaattcacaccctgcggcgatcagccgacggccatc
gacgccatttccaaaaaggttgccgagggcgccaaaagtcaggtcctgctaggcgtcacc
ggttccggcaagacgtttaccgtggccaacatcatcgcccgggtcaaccgtccagcactg
atcctggcgcccaataagaccctggcggcgcagttgtacaacgaattccggcagcttttc
ccggaaaacgccgtggaatatttcgtcagctattacgattattaccagcccgaggcctat
atccccaccaccgacacctatattcagaaggactcgtcaatcaatgagatgatcgacaaa
atgcgccattcagccacgcgcagcgtgctgtcgcgaaccgacgtcattgtcgtggctagt
gtctcttgcattttcggactgggggcgccggaggattaccttgccatgcgcatcgacatc
gaagccggcatggaactgccccgggagcggctgctctaccaactggtttccattcattat
caacgcaacgacatggactttcatcgcggcgtcttccgggtgcgcggcgatcgagtggag
atctttccagcctacgaagaagagcgggccatccgcgtcgattatttcggcgacgaaatc
gagtccatccaggagtttgacccgctgcgagggaccaccctgcgcagcatggagaaggcg
tccctctttccggccagccactacgtcaccggcaaggccaaactggaccgggccaccaag
actgttgtcgaagagatgaagcagcgggtggaattcttccggcaggaaaaccgtctcatc
gaagctcagcgcatcgaagagcgcacccttttcgacctggagatgattcaggaaatcggc
tactgcaacggcatcgaaaactattcgcgccatctgactggacgacggccgggtcagccc
ccgccgaccctgttggactatttccccgaggattttttgattttcgttgacgaaagccat
atcgccgtcccgcagatccgggccatgtataagggggaccggtcgaggaaggagaccctg
gtcaactatggcttccgcctgccttcggccctggacaaccggccgctgaaattcgaggag
tggtccgccagaatccaccagatcgtttacgtgtcggctacgccggcggattacgaactg
aaatcggccgatgaccgggtggtggaacagattgtccgacccaccggactgatcgatccg
gtggtgcacgttcgcggggctcgcaaccaggtggacgacctctaccaggagattaccacg
cgccagcagtgcggcgaacggattctggtcaccaccctgaccaagcgcatggccgaggac
ctgaccgaatactacaccgatctcgggctttccgtcaggtatctgcattccgatatttca
accatggagcgcatggacatcatccgcgacctgcgcatgggcaagttcgacgccctgatc
ggcatcaacctgctgcgcgagggcctcgacatccccgaagtatctctggtggccattttg
gatgcggacaaggagggctttctacgatctgcccgctcattgatccagaccttcggaagg
gcagctcgcaacgtcaacggtaccgtggtcctctacgccgatcgcgttaccgccgcaatg
cggcaggccatggaagagaccgaccggcggcgggccatccaagaggcgtacaacgaagaa
caccgcatcacgccccgcaccgttcacaaaaacattaccgatattttcgacatggcctac
gaaataccggaggcggagccggcgaccgtggcggaatctgtggtcgatttcgaaagcggg
aaggaagtcgagaaattgatcgagaccttggaaaacgatatgcaggccgcggccaaaaaa
ttggccttcgaagaggccgccaaaattcgggatcgcatccgctccctgaaaaaacggctg
ctttttgaaacctga
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integrated database retrieval system
