Desulfosarcina widdelii: DSCW_10820
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Entry
DSCW_10820 CDS
T06303
Name
(GenBank) putative RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dwd03009
]
DSCW_10820
Enzymes [BR:
dwd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DSCW_10820
Ribosome biogenesis [BR:
dwd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSCW_10820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
TRAM
Methyltransf_11
TPMT
PrmA
N6_N4_Mtase
TRM5-TYW2_MTfase
UPF0020
MetW
FtsJ
Ubie_methyltran
Methyltransf_12
PCMT
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
BBO73665
UniProt:
A0A5K7YYZ6
LinkDB
All DBs
Position
complement(1135436..1136824)
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AA seq
462 aa
AA seq
DB search
MTVKKKQIVECDVIDVAFGGKGLAKIDGFAVFIDQTVTGDRLAARIVRKKRNYAEAVVQE
LLRPSPMRVDAPCPYSGYCGGCKWQFIDYPHQLEFKRRHVSESLEHIAMMEGVRVHPTLP
SERVFGYRNKMEFSCSDRRWLMPHELGTDADIGFALGLHVPGTFHKVLDTDACLLQPDTG
NRILESVRRYMRQSDRPVYGLRSHEGFWRFLMLRHSVDRDRWMVNIVTASEDRDAVQPLA
DLLMDQFTEVVCVVNNITARRSGVAIGEREIHLAGEPVLTDRIGDFEFEISANSFFQTNT
RGAGRLYETVGRYADLRGDETVVDLYCGTGTIAIWLAAKARRVIGLELVESAVADARKNC
LSNGIDNCSFILGDIKDTLENIETTPDLLVIDPPRAGMHKDVLKQVCRMGPEKIVYVSCN
PATMARDMLELKADYTLEEVQPVDMFPHTFHIESVARLVRKT
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttaagaaaaaacagatcgtggagtgcgatgtcattgacgtggccttcggcggc
aaggggttggccaagatcgacggctttgcggtgttcatcgatcaaaccgtgaccggcgac
cgccttgccgcccgcatcgtccgcaaaaaacgcaattacgccgaggccgtggttcaggaa
ttgctgcgtccgtctcccatgcgtgtggacgcaccgtgtccctacagcggatattgcggc
ggctgcaagtggcagttcatcgactacccccaccagcttgaattcaagcgccgtcacgtc
agcgaatccctggagcatatcgccatgatggaaggcgtccgggtgcatcccactttgccg
tcggaacgggtgttcggctaccgcaacaagatggagttttcctgttcggaccgccgctgg
ctgatgccccacgaactgggtaccgatgccgatatcggctttgcgctgggcctgcatgtg
ccgggcacctttcacaaggtgctggacaccgatgcctgtctgctgcagccggatacgggc
aaccgcatcctggaatcggtaaggcggtatatgcggcaatccgaccgccctgtatacggg
ctgcggtcccacgaaggattctggcgctttctcatgctgcggcactcggtggaccgggac
cggtggatggtcaatatcgtcacggccagcgaggatcgcgatgcggttcaaccgctggct
gacctactcatggatcaatttaccgaggtggtctgtgtggtcaacaacatcaccgccagg
cgctcgggcgtggccatcggcgaacgggaaatccatttggccggcgagccggtgctgacg
gaccgcatcggcgatttcgaattcgagatttcagccaattcgtttttccaaaccaatacg
cgcggggccggcaggttgtatgaaacggtggggcgctatgccgatctgagaggcgacgaa
accgtagtggatctgtactgcggcacaggcaccattgccatctggctggcggctaaggcc
cgcagggtgatcggcctggaactggtggaaagcgccgtggccgacgcccgcaagaactgc
ctttcaaacggcatcgacaactgctcgttcatcctcggagacatcaaggacaccctggaa
aacatcgagacgacacctgacctgctggtgatcgacccgccgcgggccggcatgcacaag
gacgtcctcaaacaggtctgccggatgggtccggaaaagatcgtctacgtatcctgcaac
ccggccaccatggccagggacatgctggaactgaaagcggattataccttggaggaggtc
cagccggtggacatgtttccccacacctttcatattgaatcggtggccaggttggtgcga
aagacatga
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