Desulfosarcina widdelii: DSCW_12100
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Entry
DSCW_12100 CDS
T06303
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dwd03016
]
DSCW_12100 (miaB)
Enzymes [BR:
dwd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DSCW_12100 (miaB)
Transfer RNA biogenesis [BR:
dwd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DSCW_12100 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
DUF4417
Motif
Other DBs
NCBI-ProteinID:
BBO73793
UniProt:
A0A5K7Z100
LinkDB
All DBs
Position
complement(1271154..1272548)
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AA seq
464 aa
AA seq
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MKVKRLYINTIGCQMNVYDAGQIAGVLAPLGYTQTDAIESADMVVVNTCTIREKAEQKAF
SFLGRLAKIKAARPSLIVAMGGCVAQQEGEAVLKRMPHVDLVFGTHAIFRLPEMVRRIES
SHCRIVDVRLSETIETDRPVDGPLNEGQVSAFVTIMRGCDNYCTYCVVPHVRGREASRHP
DRIIEEIRMRVDRGIREVTLLGQNVNSYGNKEGLCSFAELLERVNAIEGLGRIRFTTSHP
KDLSDELIQAFGKLDKLCRHIHLPVQSGDDDILSRMNRRYSSSAYLEKLARLRQVCPDIA
VTSDFIVGFPGETDRQFQRTLELIEAVRYDGLFAFMYSDRPNAPAAKFSGKVSESVKKER
LQALLDLQQTITREKHEAMVGRVRTVLVEGPSRGLDDSTGAGGSPKIRWSGRASSNHIVH
FSASDAHSANKEILTGEFADIMIEGAYAHSLWGRRVQGSMGAEP
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaaacggctttatatcaataccatcggctgccagatgaacgtttacgatgcc
ggccagattgccggtgttctggcgccattgggatatacgcaaaccgatgccatagaatcg
gcggacatggtcgttgtcaacacctgcaccatccgggagaaagccgagcagaaagccttc
agttttctcgggcgcctggcaaaaatcaaggccgccaggccttcgctgatcgtcgccatg
ggcgggtgcgtggcccagcaggaaggcgaggcggtattaaagcgcatgccccatgtggac
ctggttttcggcacccatgccatttttcgtctgccggagatggtccgacgcatcgagtct
tcgcactgtcgcatcgtggatgtccgtctgtcggaaaccatcgaaacggatcggccggtc
gacggaccccttaacgaaggccaggtctcggcgtttgtcaccatcatgcgcggctgcgac
aattactgcacctattgcgtggtgcctcacgttcgcggccgggaggccagccgccacccg
gaccgcatcatagaagagattcgcatgcgcgtggaccggggaatccgcgaagtgaccctg
ctggggcagaacgtgaacagctatgggaacaaggaggggctttgcagcttcgccgagctg
ctggagcgggtaaacgccatcgaaggattgggacggattcgatttacgacctcgcacccc
aaagacttatccgatgaactgattcaggctttcgggaaactggacaaactgtgccgccat
attcatctgccagtgcagtccggcgacgacgacatcctcagccgcatgaaccgcaggtat
tcgagttcggcttacctggaaaaacttgcacggctcagacaggtctgtccggacatcgcc
gttacttcggattttatcgtgggctttcccggcgaaaccgacaggcagtttcagcggacc
ctggaactgatcgaagccgttcgctacgacgggcttttcgcctttatgtactcagaccgg
cccaacgcgccggcggccaagttttccggcaaggtttccgaaagcgtaaaaaaagagcgg
cttcaggcgctgctggatctgcagcagaccattacccgggaaaaacacgaagccatggtg
ggccgggtccgcaccgtgctggtcgaaggacccagtcggggccttgacgattcgaccggc
gcaggcggcagtcccaagatacggtggagcggtcgggcctcgtccaaccatatcgtccat
ttcagcgcctcggacgcacattcggcaaacaaagaaatattgacaggggagtttgcggat
atcatgatagaaggagcttacgcccactcgctgtggggccgacgcgtccagggatcgatg
ggcgccgaaccgtaa
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