Desulfosarcina widdelii: DSCW_12610
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Entry
DSCW_12610 CDS
T06303
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00541
Biosynthesis of various nucleotide sugars
dwd01100
Metabolic pathways
dwd01250
Biosynthesis of nucleotide sugars
Module
dwd_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSCW_12610 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dwd01005
]
DSCW_12610 (kdsA)
Enzymes [BR:
dwd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DSCW_12610 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
dwd01005
]
Lipid A
DSCW_12610 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
NeuB
Motif
Other DBs
NCBI-ProteinID:
BBO73844
UniProt:
A0A5K7Z5Y4
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All DBs
Position
1326214..1327002
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AA seq
262 aa
AA seq
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MKSESPFFLISGPCVIEDEAVTLRIAARLKELTDSLGIPFTFKASYDKANRTSIGSFRGP
GIAKGLELLAKVKAELDVPIISDVHRISDVDAAAEVLDVIQIPAFLCRQTDLILAVARTG
KPVNIKKGQFLAPWDIVNIVEKIRSVSSVTPMITERGVMFGYNNLVVDFRGIGIMQQTGC
PVVFDATHSVQLPGGAGNSSGGQREFAPVLARSAVAAGADGVFLEVHENPDEALCDGPNS
LYLDQLPALLTQLKAIKAALAA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcggaaagtccctttttcctgatcagcggcccctgcgtcattgaagatgaggcg
gtcacactacgtatcgccgcgcgactcaaggagctgacggacagccttggcatccccttc
acattcaaggcatcctacgacaaggccaaccgcacctccatcggctcgttcagggggccg
ggcatcgcaaaaggccttgaactgcttgcaaaggtcaaagcggagctggatgttcccatc
atatccgacgtccaccgcatcagcgatgttgatgcggccgccgaagttctcgatgtgatc
cagataccggcgtttctctgccgccagaccgaccttatcctggcggtcgcccgcaccgga
aagccggtcaacatcaaaaagggtcagtttctggccccctgggacatcgtcaacattgtc
gaaaagatacgatcggtttccagtgtgacgccgatgattaccgagcgcggcgtcatgttc
ggctacaacaatctggtggtcgatttcaggggcattggcatcatgcagcagacgggttgc
ccggtggttttcgacgccacccacagcgtgcagttgcccgggggcgccggcaacagttcg
ggcggtcagcgggaatttgccccggtactcgcccggtcggctgttgcggccggtgccgac
ggtgtgtttctggaggtccacgaaaacccggacgaagccctttgcgatgggcccaactcc
ctttatctggaccaactgcccgcccttctcacccaactcaaggccattaaagctgccctg
gccgcctga
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