Desulfosarcina widdelii: DSCW_17070
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Entry
DSCW_17070 CDS
T06303
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd03420
Nucleotide excision repair
dwd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSCW_17070 (pcrA)
03430 Mismatch repair
DSCW_17070 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_17070 (pcrA)
Enzymes [BR:
dwd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSCW_17070 (pcrA)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSCW_17070 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
DSCW_17070 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
BBO74290
UniProt:
A0A5K7Z0V5
LinkDB
All DBs
Position
complement(1806868..1808721)
Genome browser
AA seq
617 aa
AA seq
DB search
MQLSPQQQAAVEHTGSPALVVAGAGSGKTRTLTAKFAHLVESGLPPEQILAITFTNKAAD
EMKGRLIHMTGMGMQRFPWVRTYHSACFQILKEHAHLLGYSNPLQVFTAYHQQKTVKEVL
LALNYDKKHTGAVLSQISNAKNSGHPGAYFDQHPRQGHIRLIDAYERYEAVLKTANAVDF
DNILLLTRNLLRDHDAVRERYQKQFAYILCDEYQDTNDLNEEITALLLTNGNLFAVGDDW
QSIYSFRMSNVGHFLSFKKKYPGARIFRLEQNYRSADEIVQLGNCVINHNESRMEKACFS
DKEGGVVETHEFYTDQEEALWVADKIHSLNRMNIPYEKMAVLYRTKFCSLPFEQAFRRSQ
VPYHMMGGKGFFDRVEILDLNCYITAAVFNKDDTAFERILNTPKRGIGPGTVKKIAQMRT
GDMSLQEAARQAVADRVLTPKLYNSLSQVLGLLDEIRDLSPAEAITRTIAQTGYMEHLEN
YTRSNSMDFTVRQENIDQLIHAASQKETIVEYLEEAALVREDKEDEEESSGVNLSTVHGA
KGLEFHTVFVVGCEEQLFPHWRSMDRAEDLEEERRLMYVAVTRAERCLFLTSANFRKGQF
NVRSRFLDEIDDVLAEV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcagttatccccccaacagcaagccgctgtggaacataccggctcgccggccctggtg
gttgccggtgccggctctggaaaaacccgcaccttgaccgccaaattcgcccacctggtg
gaatcgggactgccgccggagcaaatcctggccatcacctttaccaacaaggccgccgac
gaaatgaaagggcgcctgattcacatgaccggtatggggatgcagcgctttccctgggta
cggacctaccacagcgcttgtttccagatcctgaaggaacatgctcacctgcttggctac
tcgaatcctttgcaggtgtttaccgcctatcaccagcaaaagacggtaaaggaggtcctg
ctggccctcaattacgataaaaaacacaccggggcggtgttgagccagatatccaacgcc
aagaacagcggacatcccggcgcctatttcgatcagcacccccggcagggccatattcgt
ctgatcgatgcgtacgaacgctacgaggccgtcctcaagacagccaatgccgtggatttc
gacaatattctgctgctcacccgcaacctgctcagggaccatgatgcggtacgagaacgc
taccagaagcagttcgcctacattctttgcgacgagtatcaggacaccaacgatctcaat
gaagagatcaccgccctgttgttgacgaacggaaatctttttgccgtgggcgacgactgg
cagtccatctattcgtttcgcatgagcaacgtcggccattttctctccttcaaaaagaaa
tatccgggagcgcgcattttccgcctggagcaaaattaccgcagtgccgacgaaatcgtc
cagttgggcaactgcgtcatcaatcacaacgaaagccgcatggaaaaggcctgtttttcg
gacaaagagggtggcgtggtcgagacgcatgagttctataccgaccaggaggaggccctc
tgggtggcggacaagatccacagccttaatcgcatgaacatcccctacgagaaaatggcc
gtgctctaccgcaccaaattctgttccctgccgttcgagcaagcctttcgcaggtcccag
gttccctaccatatgatgggcggaaaggggtttttcgaccgggtggagatcctggacctg
aactgctacatcaccgcggcggtgttcaacaaggacgacacggccttcgaaaggatcctc
aatacgcccaaacggggcatcggacccgggacggtgaaaaagatcgcccagatgcgcaca
ggagacatgagcctgcaggaggccgcccggcaggcagtggcagaccgggtgctgacgccc
aaactatacaacagcctcagccaggtgctgggcctgctggacgagattcgggatttgtcg
cccgccgaggccattacccgcaccattgcccaaaccggctacatggagcacctggaaaac
tatacccggtccaattccatggacttcaccgtccggcaggagaatatcgaccagttgatc
catgccgcctcgcaaaaagagaccatcgtggaatatctggaagaggcggccctggtccga
gaggacaaggaagacgaggaagagtcttccggcgtgaacctttcgacggtccacggggcc
aaaggtctggagtttcacacggtattcgtcgtcggctgcgaagagcaactgtttccccac
tggcggtccatggaccgcgcagaggacctggaggaagagcggcggctgatgtacgttgcc
gtgacccgggcggaacgttgcctgtttctcacctccgcaaatttccgcaaaggccagttc
aacgtgcgcagccgctttttagacgaaatcgacgatgtcctggccgaggtgtag
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