Desulfosarcina widdelii: DSCW_19280
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Entry
DSCW_19280 CDS
T06303
Symbol
lcfA_2
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00061
Fatty acid biosynthesis
dwd00071
Fatty acid degradation
dwd01100
Metabolic pathways
dwd01212
Fatty acid metabolism
dwd02024
Quorum sensing
dwd04146
Peroxisome
Module
dwd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DSCW_19280 (lcfA_2)
00071 Fatty acid degradation
DSCW_19280 (lcfA_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DSCW_19280 (lcfA_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCW_19280 (lcfA_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dwd01004
]
DSCW_19280 (lcfA_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dwd04147
]
DSCW_19280 (lcfA_2)
Enzymes [BR:
dwd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DSCW_19280 (lcfA_2)
Lipid biosynthesis proteins [BR:
dwd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DSCW_19280 (lcfA_2)
Exosome [BR:
dwd04147
]
Exosomal proteins
Exosomal proteins of breast milk
DSCW_19280 (lcfA_2)
Exosomal proteins of breast cancer cells
DSCW_19280 (lcfA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BBO74511
UniProt:
A0A5K7Z4I8
LinkDB
All DBs
Position
complement(2023435..2025213)
Genome browser
AA seq
592 aa
AA seq
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MRTGSDEIKNARWFAAYPEEIKRSLDAGYVLPEIPAHWGLRSSARYYPSTTALVYEPENF
IVNYVEFQELCERFASGLQNKMGVKKGDMVAVYARNCPEVAVAIIAISMVGAVYVGCNSL
LIKDEVAYQLNDTAAKVVVVSDELLPVIRDLVDEKKTAMESVIVFSHDQELKLSLLKKES
PDYQSPFYGFCDIFSDDSLIEPTIEPKKDIYSILYTSGTTSYPKGVMISHYNVVSACIVY
GSTLTGQFPVQDTDGLLKFTNLEKDLSTDWDFPLRHGIDWILSVPPWTHMMGFLGRLMYP
LMSALPLIHLPVFNMDSMLDMIQRYKISFGGGAPMMLSTILSRPDIETQDISCIRTWAVG
GSTVPEAVTEKFEKRISGKISEAWALTEGTMTSTKNFANRNGFKKSVSVGVPVPFTWIKV
VDPVDGLTEMPVGEEGELIQKGPTVTQGYFGKPKDTASAYRDGWLYTGDIGKMDEDGFFY
ITGRKKELIKYKGYNIAPSMLENVLFDHCDVKHCVVLGKKDPVVGELPIAFVQLKNDATA
TAKEIMDFVNGRVAPYKKIRDVIFLDEMPMLASGKANRLKLYDFLSSATGGR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccggttccgatgaaataaaaaacgcgcgatggtttgcagcgtaccctgaggaa
ataaaaagatccctcgatgcaggatatgttctccccgaaataccggctcactgggggctg
aggtcttccgccaggtattatccatcgacaaccgccttggtttacgaacctgaaaatttc
attgttaactacgtggaatttcaagaactgtgtgagcggtttgcatcaggattgcagaat
aagatgggagtaaaaaaaggcgacatggtggccgtttatgcccgcaattgtcccgaggta
gccgtcgcaattattgccatcagcatggtcggcgccgtttacgtgggatgcaattcctta
ctgatcaaagatgaagtcgcgtatcaacttaacgataccgcagccaaagtcgttgttgtt
tcggatgaattgctgccagtgattcgggatctggtcgatgagaaaaaaacggccatggaa
agcgttatcgttttttcacacgaccaggaactgaaactttctttgctaaaaaaagaatcc
ccagattaccaatcaccgttttacggtttttgcgacattttttcggatgacagcctgatc
gagcccacaatcgagccgaaaaaggatatttactccattctatatacctcagggacgacg
agctatccaaaaggcgtcatgatttcccattacaatgtcgtttcggcctgcattgtttac
ggatcgacgctcacaggtcaattcccggttcaggacaccgacgggcttttgaagttcacg
aatcttgaaaaggacctttccacggactgggactttcccttgcgccatggaatcgactgg
attctttcggtgcctccgtggacgcatatgatggggtttttgggccgcctgatgtacccg
ctcatgtctgcgctgccgcttatccatttgccggttttcaatatggactcgatgctggat
atgattcaacgttacaaaatatcctttggcggcggcgcgccgatgatgctttcgacgatc
ctgtcgcgtccggatatcgaaactcaggatatttcgtgcatacgtacatgggccgtcggt
ggttcgaccgttcccgaagccgtgaccgaaaaattcgaaaagcgcatcagtggtaaaatt
agcgaggcctgggcgctcaccgaaggtacgatgacgtcgacaaagaattttgccaatcga
aacggctttaagaagagcgtgtcggtcggcgttcccgtgccatttacttggatcaaggtc
gtcgatccggttgacgggctcacggagatgccggttggtgaagagggcgagttgatccag
aaagggccgaccgtgacccaaggctatttcggaaaacccaaagacaccgccagtgcatat
cgggatggctggctgtataccggcgatatcggaaaaatggacgaagacggctttttctat
ataacgggaagaaagaaagagctgatcaagtacaaggggtacaatatcgcgccgagcatg
ctcgaaaatgtattattcgaccattgtgacgtcaagcactgtgtcgttctcgggaaaaaa
gacccggttgtcggtgaactgcccatcgctttcgttcaattgaaaaacgacgcgacggca
acggcgaaggagatcatggacttcgtcaacggtcgcgtcgctccttataagaagatccgc
gacgtcatttttttggatgagatgcccatgcttgccagtggaaaagccaatcggctcaag
ctttacgattttttaagcagtgcgactggcggtagatga
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