KEGG   Desulfosarcina widdelii: DSCW_19820
Entry
DSCW_19820        CDS       T06303                                 
Symbol
hupB_1
Name
(GenBank) transcriptional regulator
  KO
K03530  DNA-binding protein HU-beta
Organism
dwd  Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:dwd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dwd03032]
    DSCW_19820 (hupB_1)
   03036 Chromosome and associated proteins [BR:dwd03036]
    DSCW_19820 (hupB_1)
   03400 DNA repair and recombination proteins [BR:dwd03400]
    DSCW_19820 (hupB_1)
DNA replication proteins [BR:dwd03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    DSCW_19820 (hupB_1)
Chromosome and associated proteins [BR:dwd03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    DSCW_19820 (hupB_1)
DNA repair and recombination proteins [BR:dwd03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      DSCW_19820 (hupB_1)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG 2C_adapt HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: BBO74565
UniProt: A0A5K7Z1H3
LinkDB
Position
2083086..2083349
AA seq 87 aa
MTKAELIEKIAKDADIPKTTAKAAFDSALDGIKKGLKKRNSKVTLVGFGTFKNVYRKTRM
GRNPQTGEKIKIKGRSVVTFKPSKNLP
NT seq 264 nt   +upstreamnt  +downstreamnt
atgaccaaagctgaacttatcgagaaaatcgccaaagatgccgacattcccaaaaccacc
gcgaaggcggcatttgattccgcgctggacggtatcaaaaagggcctcaagaaaaggaac
agcaaggtcaccctggtcggatttgggacctttaaaaatgtttatcggaaaactcggatg
ggccgtaacccccagacgggtgaaaagataaaaatcaaagggcgcagtgtagttactttc
aaaccaagcaagaaccttccgtag

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