Desulfosarcina widdelii: DSCW_19820
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Entry
DSCW_19820 CDS
T06303
Symbol
hupB_1
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dwd03032
]
DSCW_19820 (hupB_1)
03036 Chromosome and associated proteins [BR:
dwd03036
]
DSCW_19820 (hupB_1)
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_19820 (hupB_1)
DNA replication proteins [BR:
dwd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSCW_19820 (hupB_1)
Chromosome and associated proteins [BR:
dwd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DSCW_19820 (hupB_1)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DSCW_19820 (hupB_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
2C_adapt
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBO74565
UniProt:
A0A5K7Z1H3
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All DBs
Position
2083086..2083349
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AA seq
87 aa
AA seq
DB search
MTKAELIEKIAKDADIPKTTAKAAFDSALDGIKKGLKKRNSKVTLVGFGTFKNVYRKTRM
GRNPQTGEKIKIKGRSVVTFKPSKNLP
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagctgaacttatcgagaaaatcgccaaagatgccgacattcccaaaaccacc
gcgaaggcggcatttgattccgcgctggacggtatcaaaaagggcctcaagaaaaggaac
agcaaggtcaccctggtcggatttgggacctttaaaaatgtttatcggaaaactcggatg
ggccgtaacccccagacgggtgaaaagataaaaatcaaagggcgcagtgtagttactttc
aaaccaagcaagaaccttccgtag
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