Desulfosarcina widdelii: DSCW_22860
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Entry
DSCW_22860 CDS
T06303
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSCW_22860 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dwd03021
]
DSCW_22860 (rpoA)
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_22860 (rpoA)
Enzymes [BR:
dwd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSCW_22860 (rpoA)
Transcription machinery [BR:
dwd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DSCW_22860 (rpoA)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DSCW_22860 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
BBO74869
UniProt:
A0A5K7Z3N8
LinkDB
All DBs
Position
complement(2403293..2404312)
Genome browser
AA seq
339 aa
AA seq
DB search
MSKNELMYMNWREMIKSDKVRVSSTEAYGKFVCEPLERGFGITLGNSLRRTILSSLYGAA
IVSVRFDSVEHEFSVIPGALEDVSEIILNLKEVRLKMDDATPRTIRLESSGEGPVSAGAI
TSDDGHVEVLNPDQHIATLTGEGDLNMTMVVKVGKGYSLAEANKDEDAPIGTIPIDAVFS
PIKRVNYVVGNARVGQRTDYDKLTLEVWTDGSVTPEDAVAYGSKILKEQLSIFINFDEDA
EPQSTDSDEDQEKPSFNDNLYRSVEELELSVRSANCLKNAEILKIYQLVQKTETEMLKTK
NFGRKSLNEIKEVLSEMGLSLGMKLDNFVPPEESVEEGE
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaacgaacttatgtacatgaactggcgtgagatgatcaagtcggacaaagtt
cgcgttagcagtaccgaggcatacggcaagtttgtatgcgagccactggaaaggggcttc
ggtatcacccttggaaattctttgcgaagaacgatcctctcttcattgtatggcgcggcc
atcgtctctgtccggttcgattccgttgagcatgagttcagtgtcattcccggtgcgctt
gaggatgtgtcggagattattttgaacctcaaagaggttcgattgaagatggacgacgcc
acaccgcgcacaatccgcttagaatcgtctggtgaaggacccgtcagcgccggtgccatt
accagtgacgatgggcatgtggaggtgttgaatcctgatcagcatatcgccaccctgacc
ggcgaaggcgacttgaacatgaccatggttgtgaaagtgggcaagggatactcgctggcg
gaggccaacaaggacgaggatgcacccatcggaacgatacccattgatgcggtgttttcg
ccgatcaaacgcgtcaactacgtagtgggaaatgcccgcgtcggccagcgcacggattac
gacaagctgaccctggaagtttggacagacgggagcgtgactcccgaagacgctgttgcc
tatggttcgaaaattctcaaggaacaactgagcattttcatcaatttcgatgaagatgcc
gaaccacagtctaccgacagtgacgaggatcaggaaaagccctcttttaacgacaatctg
taccgcagcgttgaggaacttgagctttccgttagaagcgccaattgtctaaaaaatgcc
gaaatcctgaaaatttaccaacttgtacaaaaaactgaaaccgaaatgctcaaaaccaag
aacttcggtcgaaaatcgctaaatgaaatcaaggaagtcctgtccgagatggggctctcg
ctggggatgaagctcgataattttgtcccgcctgaagaatcagtcgaagaaggggagtaa
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