Desulfosarcina widdelii: DSCW_24950
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Entry
DSCW_24950 CDS
T06303
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dwd03016
]
DSCW_24950 (truD)
Enzymes [BR:
dwd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DSCW_24950 (truD)
Transfer RNA biogenesis [BR:
dwd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DSCW_24950 (truD)
Prokaryotic type
DSCW_24950 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BBO75078
UniProt:
A0A5K7Z2B0
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All DBs
Position
2606058..2607131
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AA seq
357 aa
AA seq
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MPTEKQPDKTDDRVKAAIDALTALPFVSDPLPGIGGTIKATPEHFVVEEILPYTACGQGE
HIYVTFRRSGWNTADAARAIQQRLKLAPTDVGYGGRKDKTAVVEQTFSLRCGESRPLAEI
ERALAELPFEILAIDRHRNKIKTGHVAANRFTIVVSQPEPNALPGAQAIAERLAKTGIPN
FYGPQRFGHGWQNVKRGFALFRPLKKVRKNPFMVSVVQSTLFNIWLKQRMETGGYGQLLK
GDIVKKTDTGGMFTVEDLAMDAPRFENGEIVYTGPIYGFKMKPAADAAGEIEASLLAQFG
LCAEDFRPLRSPGSRRPAILRPDELEIGESSEGLRFTFTLPSGAYATMVLREFTRST
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgccaacagaaaaacaaccagacaaaaccgatgaccgggtgaaagccgccatcgatgcg
ctgacagcgcttcctttcgtttccgatcccctgcccggtatcggcggaaccatcaaagcc
acgccggagcacttcgtggtggaagagatccttccctacacggcctgcggccagggggag
cacatctacgtgacttttcgccgcagcggatggaataccgcggatgccgcccgcgccatc
cagcaacgcctgaagctggccccaacggacgtgggctatgggggccgcaaggacaaaacc
gcggtggtcgaacagacattttcgctgcgctgcggagaaagccggccactggcggaaatc
gaacgggcactggccgagcttccctttgaaattttagccatcgaccgccaccgcaacaag
atcaaaaccggccacgtagccgccaaccgcttcaccatcgtggtcagccaacccgagccg
aacgccctgcccggtgcccaggccattgccgaacggctcgcgaagaccggcatccccaac
ttttacggcccccagcgcttcggccacggatggcaaaacgtcaaacggggattcgcgctc
ttccggccgttgaaaaaagtccgcaagaacccattcatggtttcggtggtccagtctacc
ctgttcaacatctggctcaaacagcgcatggaaacgggcggctacgggcagttgctcaag
ggcgacatcgtcaagaaaaccgacaccggcggtatgttcacagtcgaggatctggccatg
gatgccccgcgcttcgaaaacggcgaaatcgtttacaccggcccgatctatggctttaag
atgaaaccggccgcggacgcggccggggagatagaagcgtccttgctcgcccaattcggc
ctttgcgccgaagatttccgccccttgcgttccccgggttcccggcggccggcaatattg
cggcccgacgagctcgaaatcggcgaatcgtcggaaggcctgcggtttacgtttaccctg
ccctcgggtgcctatgccaccatggtcttgcgcgagttcacccgatccacgtga
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