Desulfosarcina widdelii: DSCW_28140
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Entry
DSCW_28140 CDS
T06303
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCW_28140
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dwd02000
]
DSCW_28140
Transporters [BR:
dwd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DSCW_28140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BBO75397
UniProt:
A0A5K7ZH26
LinkDB
All DBs
Position
complement(2951212..2952723)
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AA seq
503 aa
AA seq
DB search
MKRIALTLIVALLALPAVAMAKADLVVVTDAPPKSMNPHAFSSDANLSYMSNFFDGLLQR
PAPDGKLSPALAVRWERLDGTTWKFDLRKGVKFHNGNDFTAADVKFTFERMKDPQYSKLL
NIANSIASIETPDDHTVIFKTVKPVPWFAETMHQNFIVDMESSKDRDDGDYNTRPIGTGA
YKFVEWVKGSYVRMTANEDYWEGAPKYKNVDIRPITEEATRFAALAGKQADIVNGVPVTL
IERIEKMPHVQLISRPARRAIYMDISNKEGTPFADIRVRKAIAHAINEDEIIEKVMRGQA
TPAAQVPDVPTVGYVPGLKRLSYDPALAKKLLADAGYPDGFAITVAGPNDRYVNDEKICE
AVAKYLAKIGLKVTLDVKPKSIFFDELSDYKHRFYLIGWFDGSYDFGRSAEKLLHTPDKE
KGMGAYNGAIYSDPELDKMIIDSSSIIDRAERQKALQAINKKSVEDVAWIPLHYQQDIYA
VVKDSGVAFTPRPDQWIVAKEIK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaatcgccctgaccctgatcgtcgccctgctggccctgcccgccgtggcgatg
gccaaagcggacctggtggtggtgaccgacgccccgcccaagtccatgaacccgcatgcg
ttttcttccgacgccaacctttcctacatgtccaactttttcgacgggttgttgcagcgg
cctgcgcccgacggcaaactctcgccggccttggccgttagatgggagcgcctggacggc
actacctggaaattcgacctgcgcaagggggtcaaatttcataacggcaacgactttacc
gccgccgacgtcaagttcaccttcgagcgcatgaaagatccccagtattccaagctgctc
aatatcgccaactccatcgcctccattgaaacacccgacgaccacacggtaattttcaag
actgtcaagcccgtgccgtggttcgccgagaccatgcaccagaatttcatcgtggacatg
gagtcctccaaggaccgcgacgacggcgactacaacacccggcccattggcaccggtgcc
tataaattcgtcgagtgggtcaagggctcctacgtgcgtatgacggccaacgaggactac
tgggaaggcgcccccaagtataaaaacgtggacatccgcccgattaccgaagaggctacc
cgtttcgccgccctggctggcaaacaggccgacatcgtcaacggcgtgcccgttaccctg
atcgagcggatcgagaagatgccccacgtgcagttgatttcacgtccggctcggcgggcc
atctatatggatatttccaacaaggaagggacgcccttcgccgacattcgggtgcgcaag
gcaatcgcccacgccatcaacgaggacgagatcatcgagaaagtcatgcgcggccaggct
acgcctgcggcccaggtgccggatgtgcctaccgtcggctacgtacccgggttgaagcga
ctgtcctacgacccggccctggccaaaaagttgctggccgatgcgggctatcctgacggc
tttgcgatcaccgtggccggtcccaacgaccgctatgtgaacgacgagaagatctgcgaa
gcggtggccaagtacctggccaagattggtctcaaggtaaccctggacgtcaaacccaaa
tccattttcttcgacgagttgtccgactacaagcaccgcttttacctgatcggctggttc
gatggatcctacgacttcggacgcagtgccgagaagttgctgcacacgccggataaggaa
aagggtatgggggcttacaacggcgcgatttactccgacccggaactggacaagatgatc
attgattcctcgtccatcatcgaccgggctgaacggcaaaaagccctgcaggccataaac
aagaagtccgttgaggatgtggcctggattccgctgcactaccagcaggacatctatgcc
gtggttaaggactcgggagtagcgttcacgccgcgtccggatcagtggatcgtggctaag
gaaatcaaataa
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