Desulfosarcina widdelii: DSCW_28300
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Entry
DSCW_28300 CDS
T06303
Name
(GenBank) hypothetical protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dwd01011
]
DSCW_28300
Enzymes [BR:
dwd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DSCW_28300
Peptidoglycan biosynthesis and degradation proteins [BR:
dwd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DSCW_28300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM2_NFP
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
BBO75413
UniProt:
A0A5K7Z6A1
LinkDB
All DBs
Position
complement(2968144..2970207)
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AA seq
687 aa
AA seq
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MLCKRFTILFLLALAIFSISAVPVQADGERFPVYPAIEPNVAFWTQIYARYSTSQAVVHD
SLHLDIVYEVIDLKPMKEAGARKINRKRMKQASRRIADILKRLAADPKAADADCRRVAAL
FGSQPDSKTFARARGRVRCQIGQQDRFQAGVIRSGAYLDQMRAILRSSGVPEDLSYLPHV
ESSFNAHAYSKFGAAGMWQFTRSTGKRFLTVDYVLDERRDPIAATRAAALLLRENYEKLG
SWPLAITAYNHGAAGMQRAKAKHGGYPEIFASYKGRTFKFASRNFYSEFLAARQVASNYR
RYFGDITLDTPQSTQPVKMAGFAAFNDLCRHFKISPEAARSLNPALRPPVFSGQKYVPEG
YVFNLPSSSPSSGTLLSKAPADLFKTTQKPSRFYTVCRGDTAGKIARMHRVKLNDLILAN
GLDRRATVYIRQRLRIPQKDESVGLVAEKRAVDPTDSKAQPASAAGSGTVEILLPNIPLE
SAECRYRRLEPAPADLLAMADEINENASRDASIQASLVNPGVAPVDMGFHRIDRSARQPV
GIIRVEVEETLGHYAEWAGVRASSIRRLNGLSYGRHLQLNQRVKIPLGNVTADDFETRRY
EFHKRLQEDFFAVYRIGELQRYQVRPGDSYWTLCREKFDLPLWLLKHYNADINLATLKVH
QSLTIPSVESVAANDPATMDTTSAPDA
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcaaacggttcacaattttatttttattggccctggccatcttcagcatttct
gccgtgcccgtccaggccgacggtgaacggtttcccgtttaccccgccatcgaacccaat
gtcgcattctggacccaaatctatgcccgctattccacctcccaggcagtggtgcacgac
agtcttcacctcgatatcgtctacgaggtgattgacctcaagcccatgaaggaagcgggt
gcacgcaaaatcaaccgcaagcgcatgaaacaagccagccggcggatagccgatatccta
aaacggctggccgccgatccgaaagccgccgatgccgactgccggcgggtcgcagccctc
ttcggttcccaaccggattcaaaaacgttcgcccgggcgcgcggccgggtgcgctgccag
atcggtcagcaggaccgctttcaggccggcgtgattcgttccggagcctatctggatcaa
atgcgggccattttacgatccagcggtgtgcccgaagatctgtcctatctgccccatgtg
gaatcctcgttcaacgcccatgcctacagcaagtttggcgctgccggcatgtggcagttc
acccgttccacgggcaagcgttttttgacggtcgactacgtgctggacgaacgccgcgac
cctattgccgctacccgggcggcagcgctcttgctccgggagaattacgaaaagctgggc
agctggccccttgccattaccgcatacaaccacggtgccgccggtatgcagcgcgccaag
gcgaagcacggcggctacccggaaattttcgcgtcctacaaggggcgtaccttcaagttc
gcttcccgaaatttttattcggagttcctggcggccagacaagtggcctccaattaccgc
cgttattttggggacatcaccttagataccccccaatcgacccagccggtaaagatggcc
ggatttgccgcctttaacgatttatgccgccattttaaaatttctccagaggcggcccgc
agcctgaacccggcattgcgaccgccggtgttcagcggtcagaaatacgtccccgaaggc
tacgtgttcaatcttccttcaagttctccatcgagcggtaccttgctttccaaagcgcct
gccgatctgttcaagacaacccagaagcccagtcggttctatacggtctgtcgaggagac
acggccggtaaaatcgcccggatgcatcgggtgaagctcaacgacctgattctggccaac
ggactggatcggcgggcgaccgtctatatccgacagcgcctgcgcattccccagaaggac
gaatcggtgggactcgttgctgaaaaacgggccgtcgatccaacggattccaaggcgcag
ccggcttccgcggccgggagcggcactgtggagatccttctgccgaatatacccctggaa
agcgccgaatgccgatatcgacgcctggaaccggccccggccgacctgctggctatggct
gatgaaatcaacgaaaatgcgagccgggatgccagcattcaggcctcgctggtgaatccg
ggcgtcgccccggtcgatatgggctttcatcgcattgatcgcagtgcccggcaaccggtg
gggattatccgggtcgaggtggaggagaccctcggccactatgccgaatgggccggggtt
cgcgcttcttctatccgtcgcctcaacggtctttcttacggtcggcatctgcagctcaat
cagcgggtcaagattcccctcggcaatgtgactgcggacgacttcgaaacccgccgctac
gagtttcacaaacgcctccaggaggacttttttgccgtctaccgcatcggcgaactgcag
cgataccaggtgcgtccgggcgacagctattggaccctgtgtcgggaaaagttcgatctg
cccttgtggctgctcaaacattacaatgcagacatcaacctggctacactcaaggtccac
cagtccctcaccattccatccgtcgaaagtgtcgcggctaacgatcctgcaacaatggac
accacatccgcacccgatgcatga
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