KEGG   Desulfosarcina widdelii: DSCW_28400
Entry
DSCW_28400        CDS       T06303                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
dwd  Desulfosarcina widdelii
Pathway
dwd00061  Fatty acid biosynthesis
dwd00071  Fatty acid degradation
dwd01100  Metabolic pathways
dwd01212  Fatty acid metabolism
dwd02024  Quorum sensing
dwd04146  Peroxisome
Module
dwd_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:dwd00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    DSCW_28400
   00071 Fatty acid degradation
    DSCW_28400
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    DSCW_28400
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    DSCW_28400
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:dwd01004]
    DSCW_28400
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dwd04147]
    DSCW_28400
Enzymes [BR:dwd01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     DSCW_28400
Lipid biosynthesis proteins [BR:dwd01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   DSCW_28400
Exosome [BR:dwd04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   DSCW_28400
  Exosomal proteins of breast cancer cells
   DSCW_28400
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3
Other DBs
NCBI-ProteinID: BBO75423
UniProt: A0A5K7Z6B1
LinkDB
Position
complement(2978846..2980534)
AA seq 562 aa
MASPSQCTNLLDCALYWERDAADRICFTQPMGGGDANLRTWTWAQAVDEARRVAAYLKGL
DLPLRSSIALCSKNCAYWLMADLAIWMAGHVSVPIYPILTADIVNYTLEHSEARLLFVGK
LDPVWEEMKKGVPADLKTVSFPLAPENGQEQWESIVAAHSPLKDVAECPPDETATIIYTS
GSTGKPKGAMISFGAMYRSGRGLSEYLNTTPEDRTLSYLPLAHAMERFVGQAHYLYTGFQ
QFFAESLDTFVQDLQRARPTMFASVPRLWLKFQLGVFEKVPPARLDRLLKIPILSGMVKK
KILRQLGLDQVRVAASGSAPIPKEVIAWYRRLGLELLEGYGMTENFSYSHIGRPGRIRPG
YVGNPYPDVEHRISPEGEILVKSPGTMKGYFKMPEKNEHIFTEDGFFRTGDLGEIDEMGR
LKITGRAKELFKTSKGKYVAPAPIENQLASSHLVEACYVTGSGYHQAHAVVMLSEEARQK
ANGETRGILANELATLLGDVNRGLPPFEQIAFLAVAKDDWTVENGFLTPTLKIKRRVLDA
TYGPLAESWYAMNAPVVWQEAA
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggcttccccctcacagtgcaccaaccttttggactgcgccctgtactgggaacgggac
gcggccgaccgcatctgcttcacccagcccatgggcggcggcgacgccaatttgcgcacc
tggacctgggcccaggccgtcgacgaggcccgccgggtggccgcctacctgaaaggcctc
gacctgccgctgcgcagcagcattgccctgtgctccaagaactgcgcctactggttgatg
gcggatctggccatctggatggccggccacgtcagcgtaccgatttaccccattcttacc
gcggatatcgtaaactacaccctggagcactccgaggccaggctgttgttcgttggcaag
ctcgacccggtctgggaggaaatgaaaaaaggcgtcccggctgacctgaagaccgtgtcc
ttccccctggccccggaaaacggccaagagcaatgggaatccatcgtcgcggcacattcc
cccctgaaggacgtcgccgaatgcccgcccgatgaaaccgccaccatcatttacacgtca
ggcagcaccggcaagcccaagggagccatgatctcctttggggccatgtaccgcagcgga
aggggacttagcgagtatttgaatacgactcccgaagaccgcaccctctcctatctgccc
ctggcccatgccatggaacgcttcgtgggccaggcccactacctgtataccggcttccag
caatttttcgccgagtccctggacactttcgttcaggatctgcagcgggcgcggccgaca
atgttcgcttcggtgccgcggctgtggctcaagttccagttgggagtgttcgagaaggtc
ccgccggccaggctggatcgactcctgaaaatccccattctcagcggcatggtgaaaaag
aagatcctccggcagttggggctggatcaggtgcgcgtggccgcctccggatcggcgccc
attcccaaggaggtcatcgcctggtatcgtcgcctgggccttgaactgctggaaggctat
ggcatgacggagaacttctcctattcccacatcggtcggcccggcaggatccgacccggt
tacgtgggcaatccctatcccgacgtggagcaccgcatcagcccggaaggggagatcctc
gtcaaaagccccggcaccatgaaagggtatttcaaaatgcccgaaaaaaacgaacacatc
tttaccgaggacgggtttttccgtaccggcgacctgggggaaatcgatgagatggggcgg
ctgaaaatcaccggccgggccaaagagctgttcaagacctccaagggcaaatacgtggcc
ccggcgcccatcgagaaccaactggccagcagtcacctggtggaagcctgctacgtcacc
ggcagcggctatcatcaggcccacgccgtggtcatgctcagcgaggaggcgcgccagaag
gcaaatggagagacccggggcatcctggccaatgaactggcaaccctgcttggcgacgtc
aatcgtggcctgccgcccttcgagcagatagcctttctggcagtggccaaggatgactgg
accgtggaaaacggctttctgaccccgaccctcaaaattaaacgccgggtgctggacgcc
acctacggtcccctggcggaatcctggtatgccatgaatgcgccggtagtctggcaggag
gcggcgtga

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