Desulfosarcina widdelii: DSCW_29990
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Entry
DSCW_29990 CDS
T06303
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dwd01002
]
DSCW_29990
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dwd01011
]
DSCW_29990
Peptidases and inhibitors [BR:
dwd01002
]
Cysteine peptidases
Family C82
DSCW_29990
Peptidoglycan biosynthesis and degradation proteins [BR:
dwd01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DSCW_29990
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GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
BBO75582
UniProt:
A0A5K7Z0T2
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All DBs
Position
complement(3164374..3166029)
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AA seq
551 aa
AA seq
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MAKPVRDFLVLKREFIVCCVWVLSFILSPASISMAADGKAPVSTILKELLGTTVPLTILP
EEEPLHARTALQKFYVNRGYSPAWSDHSGQTPLSELVSFIWRIDEHGLSPDDYHLSALES
ANAGDDPVAVELLATDAFLTMAAHLVGGRLNPVTIETDWTAMRRERDLVKHLEDAVSSRT
IAASLSDLEPNAPGYGVLKHALAMYRKSSRDGGWSPIPEDAALKPGHEGPGVVKLRERLR
ATGLLDVSASVSDRFDAELQAAVAMFQRRVGLEADGVVGPKTLRELNKSPAERVDQIRAN
LERWRWLPEDLGDRHIRVNIADFRLEARRNGRIERVHDVIVGQPYRMTPVFSGEISYVVL
NPWWDVPDSIARLDKLPEFRKDPKAVTRLGIEVLDRSEKVIDPKNIDWGRYTTWNFPFRL
RQRPGPHNALGMVKIMFPNRHNVYLHDTPSRDLFARTERAFSSGCVRVSDAIGLAEWVLD
ETPGWTRSEIDHTISEKREKRINLRKNIPVYILYFTAVSEPDGSLRLINDIYGRDARLVA
ALNGSTSTAKR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccggtaagagacttcctggttcttaaacgcgagttcatcgtgtgctgtgtt
tgggtgctttcctttatcctttcgccggcttcaatatcgatggcggcggatgggaaggca
ccggtatccacgatattgaaggaactgctgggcacaaccgtcccgctaacaattctcccg
gaggaggagccgctccatgccagaactgcgcttcaaaaattttatgtcaaccgcggttat
tctccggcctggtcggatcattccggtcagaccccgttatcggagcttgtaagcttcatc
tggcggatcgacgaacatgggttgtcgccagatgactaccatctgtccgctctggaaagc
gccaacgccggcgacgacccggtggcggtcgaactgcttgccaccgatgcctttctaacc
atggcggcccatcttgtcggcgggcgcttgaatccggtaacgatcgaaaccgactggacc
gccatgcgtcgcgaacgcgacttggtgaagcatctggaagatgcggtttccagccgaacg
attgccgccagcttgtcggacctcgaacccaatgccccgggttacggtgtcctcaagcat
gccttggcaatgtatcgcaagtcctccagagacggaggctggagccccataccagaggac
gctgcactaaaaccaggccatgaaggtcccggagttgtcaaattgcgcgagcgactccgg
gccacggggcttcttgatgtttcagcatcggtttcggaccggttcgacgccgaactccag
gccgccgttgccatgtttcagcgtcgggtcgggttggaggccgatggtgtggtggggccg
aagacgcttcgagagttgaataaaagtccggccgaacgtgtcgatcagatccgcgccaac
ctggaacggtggcgttggctgccggaggatctcggagatcggcacattcgcgtaaacatt
gccgactttcgcctcgaggcgcgaagaaacggacggatagagcgcgtccacgatgtgatt
gtcggccaaccctatcgcatgacgccggttttctcaggggagatttcctatgtcgtgctg
aatccctggtgggatgtccccgacagcatcgcccgtctggacaaactgccggaatttcgc
aaagacccgaaagcggtgacccgtctaggaatcgaagtgctggatcgatccgaaaaagtc
atcgatccaaaaaatatcgactggggcagatacaccacctggaattttcctttccgcctc
cggcagcggcccggcccacacaacgccctggggatggtcaagatcatgttccccaacagg
cacaacgtctacctgcacgatacaccgtcgcgggatttgttcgcgcgcaccgaacgggcc
ttttcttcaggatgcgtgcgggtttcggatgcgattggattggcggaatgggtgcttgac
gaaacgccgggctggacgcggtcggaaatcgatcacaccatctcggaaaaacgcgagaag
cggatcaatttgagaaaaaacattccggtttacatcctttattttaccgcggtttccgag
cccgacggctccttgcgtctgatcaacgacatttacggccgcgacgcgagactcgttgca
gcgttgaatggttcgacgtcaacggctaaacgatga
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