Desulfosarcina widdelii: DSCW_30590
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Entry
DSCW_30590 CDS
T06303
Symbol
groL_1
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DSCW_30590 (groL_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwd03019
]
DSCW_30590 (groL_1)
03110 Chaperones and folding catalysts [BR:
dwd03110
]
DSCW_30590 (groL_1)
03029 Mitochondrial biogenesis [BR:
dwd03029
]
DSCW_30590 (groL_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dwd04147
]
DSCW_30590 (groL_1)
Enzymes [BR:
dwd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DSCW_30590 (groL_1)
Messenger RNA biogenesis [BR:
dwd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DSCW_30590 (groL_1)
Chaperones and folding catalysts [BR:
dwd03110
]
Heat shock proteins
HSP60 / Chaperonin
DSCW_30590 (groL_1)
Mitochondrial biogenesis [BR:
dwd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DSCW_30590 (groL_1)
Exosome [BR:
dwd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DSCW_30590 (groL_1)
Exosomal proteins of other body fluids (saliva and urine)
DSCW_30590 (groL_1)
Exosomal proteins of breast cancer cells
DSCW_30590 (groL_1)
Exosomal proteins of colorectal cancer cells
DSCW_30590 (groL_1)
Exosomal proteins of bladder cancer cells
DSCW_30590 (groL_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBO75642
UniProt:
A0A5K7Z0Y7
LinkDB
All DBs
Position
3226348..3227970
Genome browser
AA seq
540 aa
AA seq
DB search
MAAKMFVYGSSAREAMLKGVNTLANAVKVTLGPKGNNAVLEKSFGSPLVTKDGVTVAKEI
ELTDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIYAEGQKLVAAGANPMSVKRGI
DKGTAAVVEALKKMSKPTKDRKEIEQVGTISANNDETVGQLISEAMEKVGKEGVITVEEA
KSMDTTLDIVEGMQFDRGYLSPYFVTDAEKMLTELDEPYILLNEKKISSMQDLLPLLEST
AKTGKPLLIIAEDVDGEALATLIVNKLRGTLKVAAVKAPGFGDRRKAMLQDIAILTGGQV
VSEDLGIKLENLTVNDLGKCRTVKIDKDNTTIVDGAGTKSAIEGRVKQIRAQIEETKSDY
DREKLQERLAKLIGGVAVINIGAATETEMKEKKARLEDALNATRAAVEEGIVPGGGVALL
RCSDALDKLDVRGEEKSGVAILKRALQEPLRQIVGNAGLEGSVVVNKVLEGKDDYGFNAA
TETYENLLAAGVIDPTKVVRFALQNASSVTGLMLTTEAMIADKPEKKKGSAAPPMDDDMY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaaatgtttgtttacgggtccagcgcccgcgaggcaatgctcaaaggggtc
aacaccctggccaacgcggtcaaggtcaccctcggtcctaaaggcaacaatgcggtactc
gagaaatcattcggctcgccactggttaccaaggacggcgtgaccgtggccaaggagatc
gaactgaccgataaattcgagaacatgggcgcccagatggtcaaggaagtagccagcaaa
accagcgatgtggccggggacggtacaaccacggccacggtgctggcgcaggccatctat
gccgaaggccagaaactggtggccgccggggccaatcccatgtccgtcaagcgcggcata
gacaagggaaccgccgcggttgtggaggccctgaaaaagatgtccaaacccaccaaggac
cgcaaggagatcgagcaggtcggcaccatctcggccaataacgacgaaaccgtcggccag
ttgatttccgaggccatggagaaagtgggcaaagagggcgtcatcaccgttgaagaagcc
aagagcatggatacaaccctggatatcgtggaaggcatgcagttcgaccgaggttacctt
tccccctatttcgtcaccgatgccgagaaaatgctcaccgaactggatgagccctatatc
ctgctcaacgaaaagaaaatatccagcatgcaggacctgctgcctctgctggaatccacg
gccaaaacgggcaagcctttgctgattattgccgaggacgtggacggcgaagccctggcc
acgctgatcgtcaacaaattgcgcggcactttgaaggtggcggccgtcaaggcacctggt
ttcggagaccggcgcaaggccatgctccaggatatcgccatcctcaccggaggtcaggtg
gtttccgaagacctgggcatcaaactggaaaacctgaccgtcaacgacctgggcaaatgc
cggaccgtgaagatcgacaaggacaacaccaccatcgtcgacggcgccggcaccaaatcg
gccatcgagggccgcgtcaagcagatccgcgcccagatcgaagagacgaaatccgactat
gaccgcgaaaagctccaggagcgtctggccaaactgatcgggggcgtggccgtgatcaat
atcggcgcggccacggagaccgaaatgaaagagaaaaaggcccgcctggaagacgccctc
aacgcaacccgtgcggccgttgaagagggcatcgttcccggcggcggcgtggctctactg
cgctgcagtgacgccctcgacaaactggatgtccgcggagaagagaaaagcggtgtggcc
atcctgaagcgcgccctccaggagcctctgcgccagatcgtgggcaatgccggcctggaa
ggttcggtggtggtcaacaaggtcctcgaaggcaaggacgactatggtttcaacgctgcc
acggaaacctatgagaacctgttggctgccggcgttatcgaccccaccaaggtggtgcgc
ttcgccctgcagaatgcctcctcggttaccggcctcatgctgaccaccgaggcgatgata
gccgataagcccgagaagaaaaaagggtctgccgcaccgcccatggacgacgacatgtat
tga
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