Desulfosarcina widdelii: DSCW_33220
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Entry
DSCW_33220 CDS
T06303
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSCW_33220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_33220
Enzymes [BR:
dwd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DSCW_33220
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSCW_33220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
SH3_13
UvrD_C_2
OB_YrrC
Viral_helicase1
AAA_11
HHH_5
Helicase_RecD
DEAD
HHH_8
AAA_22
HHH_2
UvrD-helicase
AAA_18
AAA_28
AAA_25
UvrD_C
HHH
nSTAND3
5_3_exonuc
NPHP3_N
TK
HHH_3
Rad17
Motif
Other DBs
NCBI-ProteinID:
BBO75905
UniProt:
A0A5K7Z5C2
LinkDB
All DBs
Position
complement(3544090..3546636)
Genome browser
AA seq
848 aa
AA seq
DB search
MDSNSKTGKIIEQLRGIVDRVTYHNADNGWSVLRVRPLADPHQQETVTVHQTKVFAGATM
EFHGAWTVHPKFGRQFKAIKAVEKRPATAAALEKYLGSGLIKGVGPKTAKKIVKYFGSDT
LDVFENEIERLTEITGIAQKKLAMIRQAWVEHRAIRNVMMFLQSHGISTLFAVRIYKEYG
DDAIETVNEDPYRLARDFYGIGFFSADKVALSIGLATDSPQRIMAGINHVLAASREFGHC
YLRRSQITAQVNELLGLRLDDRIPDYLGQMQKDGLVMARELPVLDEGVETCYYSRTLYFD
ERYVARRVSDATDSPQVDHERVEDWLNRYCEAKQFRLSDEQLEAIRGIVSEKFSVLTGGP
GCGKTTATLVLVKLLEAMRKKILLAAPTGRAAQRMMDVIGRESKTVHRLLEWQIGNFKRN
EEHPLDVDFIVIDECSMLDISLAASLLKAIPQKSQILFIGDADQLPSVGAGNVLRDIIAS
GVVRCFELKTVFRQARESFIIQYAHQINHGDLPYIDTPFKKPEIWQQKVDCLFMDSDEAT
QEQLNFIARVKRFYDSRAPEQDATADPAENPYEFRIHEVVTPYETELIVPKKFQHVDLRN
VVEAEGDVEELLSVLKKVHPWSSLHYGLSASEVVRKLYLEWIPKYFGENTEIQILSPMTR
GSLGTVNLNRTIQESANPARTGKHELTVGERVFRVGDRVIHRRNNYDLNVFNGDIGNIRD
IDTENLTLSVSFYPDGRVVEYSRDAIPELDLAYAITIHKSQGSEFEVVILPVLTQHFKML
FRNLLYTGLTRARRLAVLVGTRKAMAMAVRNRDTSRRQTALRELLVGLRSEDRGQRTEDG
RWRSDDED
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggattccaattcgaaaaccgggaaaattatagaacagctgaggggcattgtggaccgg
gtcacctatcacaatgccgacaacggctggtcggtcctgcgtgtgcggccactggccgac
ccccaccagcaggagaccgttacggttcaccaaacaaaggtctttgccggagccaccatg
gaattccatggcgcgtggaccgtgcacccgaagttcggccgccagttcaaggccatcaag
gccgttgaaaaaagacccgccactgccgcagcattggagaaataccttggctccggactt
attaaaggggtcggtccgaagacggcaaagaaaatcgtaaaatatttcggcagcgacacg
ctcgacgtgtttgaaaacgagatcgaacgcctcaccgagattaccgggattgcccaaaaa
aaactggcgatgatcagacaggcttgggttgagcaccgggccatccgaaatgtgatgatg
tttctgcagtcccacggcatcagcacgcttttcgctgtgaggatctacaaggaatacggt
gacgatgccattgaaaccgtcaacgaggacccctaccggctggcccgggatttttatggc
atcggcttcttttcggcggacaaggtcgccttgagtatcggtcttgcaaccgacagcccc
caaagaatcatggccggcatcaatcacgtcctggccgccagcagggagttcggccattgc
tatctgaggcggtcgcaaattaccgctcaagtgaatgagctgctcgggttgcggcttgac
gatcggatacccgactacctcggccagatgcagaaagacggccttgtcatggcccgtgaa
ttgcccgttttggatgaaggcgtcgaaacctgctattattccagaaccctttatttcgac
gaacggtacgtcgccagaagggtttccgatgcgaccgattcgccgcaggtagatcatgag
cgcgtcgaagactggctcaaccggtactgcgaagcaaaacaatttcgcttgagtgatgag
cagttggaagccatcaggggcatcgtatccgagaaattttccgtgctgaccggcggtccc
ggatgcgggaaaacgacggcaaccctggtcctcgtcaaattgctcgaggcgatgcgcaag
aaaatcctgcttgccgccccgacaggccgggcggcgcaacgaatgatggatgtcatcggg
agagagtcgaaaaccgtccatcgattgctggagtggcagatcggcaatttcaaaaggaac
gaggagcatccgctcgatgtggattttatcgtcatcgacgaatgctccatgctggacatc
agcctcgccgcatccctgctgaaagccattccgcagaagagccagatcctttttatcggt
gacgccgaccagcttccatcggtcggagccggcaacgtccttcgcgatattattgcctcc
ggagttgttcgctgcttcgaactcaaaaccgttttccggcaggcccgggaatctttcatc
atccaatatgcccaccagatcaaccacggcgatctgccttacatcgatacgccctttaaa
aagcccgagatctggcagcaaaaagtggactgcctgttcatggactcggacgaggccacg
caggagcagctcaatttcatcgctcgggtcaagcgattctacgattctcgggctccggaa
caggacgccacggcagacccggccgaaaacccttacgagttcagaattcatgaggtggtc
accccttacgagacggaactgatcgtcccgaaaaaattccagcatgtggacctgagaaac
gtcgtcgaggccgaaggcgatgtcgaggaactgttgtccgttctgaaaaaggttcacccc
tggtcgtcgctgcattacggcctgtcggcatccgaagtggtgcggaagctctatctggaa
tggatccccaaatatttcggggaaaataccgagatccagattctctcgcccatgacccgg
ggcagcctgggtacagtcaatctgaaccggaccatccaggaatcggccaatcccgcccgg
acgggcaaacacgaactgacggtaggcgagcgggttttcagggtcggcgaccgggtgatt
caccgccggaacaattatgacctgaacgtattcaacggcgatatcgggaatattcgcgat
atcgataccgagaacctgacactgtcggtctccttttacccggatggccgggtcgtggaa
tacagccgcgacgccatccccgagttggatctggcctacgccattaccatccataagtcc
cagggcagcgaattcgaggtggtgatactgccggtgctgacccagcatttcaaaatgctt
ttcagaaacctgctttatactggcttgacgcgcgcccgccggctggccgtgttggtgggc
acccgcaaggccatggccatggcggtgcgcaaccgtgacacgagccgacggcagactgcg
cttcgggagttgctggtgggactgaggtcggaggacagaggacagaggacggaagatgga
agatggaggtcggatgatgaagattga
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