Desulfosarcina widdelii: DSCW_36360
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Entry
DSCW_36360 CDS
T06303
Symbol
ihfB-1_7
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dwd03032
]
DSCW_36360 (ihfB-1_7)
03036 Chromosome and associated proteins [BR:
dwd03036
]
DSCW_36360 (ihfB-1_7)
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_36360 (ihfB-1_7)
DNA replication proteins [BR:
dwd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSCW_36360 (ihfB-1_7)
Chromosome and associated proteins [BR:
dwd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSCW_36360 (ihfB-1_7)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSCW_36360 (ihfB-1_7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-DNA_bdg
YtxC
Motif
Other DBs
NCBI-ProteinID:
BBO76219
UniProt:
A0A5K7Z7T1
LinkDB
All DBs
Position
complement(3900147..3900425)
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AA seq
92 aa
AA seq
DB search
MNKMELIEALSDSDALLSKSTAADIVKLFFDEMTNALANGDRVEIRGFCSFFVKEYKGYI
GRNPKTVEQVNIAPKKLPFFKPGKELKERVDR
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaatggagcttatcgaggcactcagtgattctgacgcgcttctatcaaaatcg
acggcagcagatatcgtgaaactgtttttcgatgaaatgaccaacgccctggcaaatgga
gatcgcgtcgagattcggggattctgctccttctttgtaaaggagtacaaggggtacatt
ggccgcaatcccaaaactgtggaacaggttaatatcgctccgaagaagctaccgtttttt
aaaccggggaaggagttgaaggagcgggtggatcggtga
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