Desulfosarcina widdelii: DSCW_38390
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Entry
DSCW_38390 CDS
T06303
Symbol
glyA_1
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00260
Glycine, serine and threonine metabolism
dwd00460
Cyanoamino acid metabolism
dwd00630
Glyoxylate and dicarboxylate metabolism
dwd00670
One carbon pool by folate
dwd00680
Methane metabolism
dwd01100
Metabolic pathways
dwd01110
Biosynthesis of secondary metabolites
dwd01120
Microbial metabolism in diverse environments
dwd01200
Carbon metabolism
dwd01230
Biosynthesis of amino acids
dwd01240
Biosynthesis of cofactors
dwd04981
Folate transport and metabolism
Module
dwd_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DSCW_38390 (glyA_1)
09102 Energy metabolism
00680 Methane metabolism
DSCW_38390 (glyA_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSCW_38390 (glyA_1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DSCW_38390 (glyA_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DSCW_38390 (glyA_1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DSCW_38390 (glyA_1)
Enzymes [BR:
dwd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DSCW_38390 (glyA_1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BBO76422
UniProt:
A0A5K7Z325
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All DBs
Position
4116934..4118193
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AA seq
419 aa
AA seq
DB search
MDIQTIREVDPEIARVIEEEEERQQSHLELIASENIASLAVMAAQGSILTNKYAEGYPKK
RYYGGCEYVDRAEQLAIDRALALFGAESANVQPHSGSQANMAAYFALLEPGDTVLGMNLA
HGGHLTHGAKVSFSGRLFNFVHYGVDRETETIDYDQVEHLAREHRPKMIVAGASAYPRFI
DFAALATIARSVDALLLMDMAHIAGLVAAGVHPSPIPHCDVVTSTTHKTLRGPRGGLILA
REACGKKIDSQVFPGIQGGPLMHVIAAKAVALKEAQGAPFKQYQKNIVANAAALAETLKE
RGLDLVSGGTDNHMMLINLTRLDITGKDAEAALGRAGITVNKNAIPYETRGPKITSGVRL
GTPFVTSRGMMAGEMKVIGGMIDDVLRDCGNETLIAKTRDRVRQLCEEFPLYPEKGLES
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
ttggacatccaaaccattcgagaagtcgatcctgaaatcgctcgggtcatcgaggaagaa
gaggagcgtcagcagtcccaccttgagctgatcgcctccgaaaacatcgccagcctggcc
gtcatggcggcccagggcagcatcctgaccaacaaatatgccgaagggtacccgaaaaaa
cgatactacggcggctgcgaatacgttgaccgggcggaacagttggccatcgaccgggcc
ctggccctgttcggcgccgagagcgccaacgttcagccccattcgggctcccaggccaat
atggccgcctatttcgccctgctggaacccggcgacacggtgctgggcatgaatctggcc
catggcggccatctgacccatggagccaaggtcagtttctccggccgtcttttcaatttt
gtacactatggcgtggatcgggaaacggaaaccatcgactacgatcaggtggagcacttg
gcccgagaacaccggcccaagatgatcgtggccggtgccagcgcctatccccgatttatc
gactttgcagccctggcgaccatcgcccgttcggtcgatgccctgctgctgatggatatg
gcccacatcgccggcctggtggcggccggggtgcatccgtcgcccattccccactgcgac
gtggtcacctccaccacccataaaaccttgcggggaccgcgagggggtttgattttggcc
cgggaagcgtgtgggaaaaaaatcgacagccaggtgttccccggcattcagggcggtccg
ctgatgcacgtcatcgcagccaaggccgtagccctcaaagaggcccagggggccccgttc
aagcaatatcagaaaaacatcgtggccaacgccgcggccctggccgaaacactgaaagaa
cgggggctcgacctggtatccggcgggaccgataaccatatgatgctgatcaacctcacc
cgactggacattaccggcaaggatgccgaggcggcgctgggtcgggccggcatcacggtc
aacaaaaatgccattccttacgaaacccgcggccccaaaatcaccagcggcgttcgcttg
gggacgccgtttgtcaccagccgcgggatgatggccggggaaatgaaggttatcggcggc
atgatcgacgacgtgctgcgtgattgcggaaacgaaaccctgatcgccaaaaccagggac
cgggtgcggcaattgtgtgaagaatttcccctctacccggaaaaggggcttgagtcatga
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