Desulfosarcina widdelii: DSCW_39550
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Entry
DSCW_39550 CDS
T06303
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwd03019
]
DSCW_39550 (rnc)
03009 Ribosome biogenesis [BR:
dwd03009
]
DSCW_39550 (rnc)
03036 Chromosome and associated proteins [BR:
dwd03036
]
DSCW_39550 (rnc)
Enzymes [BR:
dwd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
DSCW_39550 (rnc)
Messenger RNA biogenesis [BR:
dwd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSCW_39550 (rnc)
Ribosome biogenesis [BR:
dwd03009
]
Eukaryotic type
90S particles
RNase
DSCW_39550 (rnc)
Prokaryotic type
rRNA processing factors
DSCW_39550 (rnc)
Chromosome and associated proteins [BR:
dwd03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
DSCW_39550 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BBO76538
UniProt:
A0A5K7Z6A3
LinkDB
All DBs
Position
complement(4242458..4243174)
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AA seq
238 aa
AA seq
DB search
MTTSQNEETADNQRLETALGYHFNDPALLTGALCHSSYVNEQSRDNLESNERLEFLGDAV
LNLSISHLLMQRYPELAEGELSRNRAQLVNETQLAAIARKLSLGPHLLLGKGEALTGGRE
KNSILADAAEAVIAAIYLDGGFDAAFAFVESRFSRQLAKVNRGRYETDYKSQLQEHAQSV
YREIPQYRVIETRGPDHSKTFRVQVSVADVTAEGDGKSKKMAEQEAARVGLELLDKHP
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgacgacatcccaaaacgaagaaaccgccgataaccaacgtttggaaacggccttgggc
taccatttcaacgatcccgcgctattgaccggcgccctgtgccacagttcctatgtcaac
gagcagtcccgtgacaatctggaaagcaacgaacggctcgaatttttaggcgatgccgtt
ctcaatctgtccatcagccacctgctgatgcagcgctacccggaactggccgagggtgaa
ttgtccagaaaccgggcccagttggtcaatgaaacccaattggccgccatcgccaggaaa
ctctcactcggcccgcacctgttgctgggcaaaggcgaagcgttgaccggcggcagagaa
aaaaactccatcctggcggatgccgccgaggcggttatcgccgccatctatctggatggc
ggcttcgatgcggctttcgccttcgtcgaaagccgcttttcccggcaattggccaaggtc
aaccgcggccgctacgaaaccgattacaaaagccagcttcaagagcacgcccagtccgtc
tatcgcgaaattccgcagtatcgggtcatcgaaaccagaggaccggatcacagcaagacc
ttccgggtgcaggtgagcgtggcggacgtcactgccgaaggggatggaaaaagcaaaaaa
atggccgaacaggaagcggcccgggttggcctggagctgttggataaacacccttga
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