Desulfosarcina widdelii: DSCW_40710
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Entry
DSCW_40710 CDS
T06303
Symbol
lysA-1
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00300
Lysine biosynthesis
dwd00470
D-Amino acid metabolism
dwd01100
Metabolic pathways
dwd01110
Biosynthesis of secondary metabolites
dwd01120
Microbial metabolism in diverse environments
dwd01230
Biosynthesis of amino acids
Module
dwd_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSCW_40710 (lysA-1)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSCW_40710 (lysA-1)
Enzymes [BR:
dwd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DSCW_40710 (lysA-1)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
FAM199X
Motif
Other DBs
NCBI-ProteinID:
BBO76654
UniProt:
A0A5K7ZDY7
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Position
4382684..4383922
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AA seq
412 aa
AA seq
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MDYFDYRENELWAEEIRVSDLARQFGTPLYVYSARTLRRHVNVFDEALAGLDHLTCFSVK
ANGNIHILRLLGSMGSGVDIVSGGELFRAIMAGIPPAKIVYSGVGKQDHEIREALAANIL
MFNVESVAELERISQIATEMGAVARISLRINPDVDPKTHPYISTGLKKNKFGLDMLEATG
AYLMAKKLPAVSPIGMDCHIGSQLTQIDPFVETLEKLLAFIDRLKTSGIDIRYLDLGGGL
GITYDEETPPQPADLGRVVAEAVRERGLTVILEPGRAIAGNAGILVTKVLYTKKTRAKNF
IIVDAAMNDLVRPSLYGAYHHIGEVAPKKRKKLKVDVVGPICESSDFLAQDRLLPEVASG
ELLAIFSAGAYGFAMSSQYNARPRAAEVIVDAEQITLARRRETYGDLVALEG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggattatttcgactaccgcgaaaacgaactgtgggccgaagagatccgcgtgagtgat
ctggccaggcaattcggcaccccgttgtatgtttattccgccaggaccttaaggcgccat
gtcaacgtcttcgacgaagcactggccggactggaccacctgacctgcttctcggtcaaa
gccaacggcaacatccatattttgcgactactgggcagtatgggttccggtgtggacatc
gtttccggcggagagctgttccgggccatcatggccggcattccccctgccaagatcgtt
tactcgggggtgggcaagcaggaccacgagattcgcgaagccctggcggcgaacattctc
atgttcaacgtcgagtccgtggcggaactggagcgcatcagccagatcgcgacggaaatg
ggcgccgtggcccgcatcagtctgcgcatcaaccccgacgtggaccccaaaacccatccc
tacatctccactgggctgaaaaaaaacaagttcggcctggacatgctggaggccaccggg
gcctacctgatggccaaaaagctgcccgcggtctcgcccataggcatggactgccacatc
ggctcccagctcacgcagatcgatccgtttgtggaaaccctggaaaaactgctggccttt
atcgaccggttgaaaacctcgggcatcgacatccgctacctggacttgggcggcgggttg
ggcatcacctacgacgaggagacgccgccccagccggcagacttgggccgcgtcgtggcc
gaagcggtgcgcgaaagaggcctgaccgttattctggagccgggccgcgccattgcaggc
aatgccggcattctcgtcacaaaggtcctttacaccaagaaaacgcgcgccaagaatttt
atcatcgtggatgccgccatgaacgacctggttcgcccctcattgtatggcgcctaccac
cacatcggcgaagtggcgcccaaaaagcggaaaaaactaaaggttgatgtggtgggcccc
atctgcgaaagctccgattttctggcccaggaccgcctgctgcccgaggtggcttccgga
gagctgctggcgatattctcagccggagcctacggctttgccatgtcttcccaatacaac
gcacgcccccgcgccgcagaggtgatcgtggacgccgagcagattaccctggcccgcagg
cgggagacctatggggacctggtggctctggagggctaa
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