Desulfosarcina widdelii: DSCW_41820
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Entry
DSCW_41820 CDS
T06303
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dwd03032
]
DSCW_41820 (gyrB)
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_41820 (gyrB)
Enzymes [BR:
dwd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DSCW_41820 (gyrB)
DNA replication proteins [BR:
dwd03032
]
Prokaryotic type
DNA Topoisomerases
DSCW_41820 (gyrB)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DSCW_41820 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
GyrB_hook
Toprim_4
DUF1797
Motif
Other DBs
NCBI-ProteinID:
BBO76765
UniProt:
A0A5K7Z7T3
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All DBs
Position
4506891..4509296
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AA seq
801 aa
AA seq
DB search
MNENFDNYDASSIDVLEGLEPVRLRPSMYIGNVDVAGFHHLVYEVVDNSIDEAMAGYCDR
IQVTIHPDNSISVEDNGRGIPVDIHRTENVPAVEVVLTKLHAGGKFDNDSYKVSGGLHGV
GVSVVNALSKFLEVEIYSKGKKYYQTYERGIKTSELKMAGDTDKRGTWIHFIPDDQIFTV
SEFNYDILSRRLRELAFLNKGVTIDIRDERFDKDDSYCYEGGIVSFVEYLNKRHTALHEP
VFIEGYRNDVNIEVAIQYNGTYKENIFSFANNINTVEGGFHLIGFKAALTRCINQYAVNG
NLPKNLSAKISGDDVREGLTAIISVRIKSPQFEGQTKTKLGNSEVKGLVESLVNEKLSTF
MEENPAVARKIIEKAVDAARARDAAKRARDLARNKGALIDSTLPGKLAECQISDPEEREL
FLVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKARFDKILRSEEIKNIITALGTGVGK
EEYNIDKIRYHKVIIMTDADVDGSHIRTLLLTFFYRQMPELVDKGYLYIAQPPLFKIGKG
KSESYMQDENELNDYILKKSCEKREVRVVNGNIVLKDHELFIFLCNLAEYDAAIAKLENR
GYHASIIEILLQSDVQDKYFFQDRTNIEALKETFESKGHTVEMVSWNEEDELFELSVRSE
KQSKFDKAVIIGRSVIYSSDFQKCLLLHKKLITEDQPPFEVIIKESDTPPVVLEDKRVLL
RHLLEDGKKGIHIQRYKGLGEMNPEQLWQTTMHPDKRNLLKVTVEDAVESDEIFTILMGD
EVEPRRDFIQNNALEVSTLDI
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaatttcgataattacgatgccagcagtatcgatgttttggaaggacttgaa
ccggtaaggttaagaccttccatgtatattggaaatgtggacgtcgccggttttcatcat
cttgtttacgaggtggtggacaacagtatcgacgaagcgatggccgggtattgcgaccgt
attcaggttaccattcatccggacaacagcataagcgttgaagacaatgggcgtggaatt
ccggttgacatccaccgaacggaaaatgtgccggcagtggaagtggttctcaccaaattg
catgccggtggaaagttcgacaacgacagctacaaagtatccggaggtcttcacggcgtc
ggagtgagtgttgttaatgcattatccaagtttctggaagttgaaatttactccaaaggg
aaaaaatactaccagacctatgagcggggaataaaaacaagcgaactgaaaatggcgggc
gataccgacaaaaggggaacctggatccattttattcctgacgatcagatttttaccgtt
tcggaatttaactacgacattctgtcccgccgattgcgtgaactggcttttctcaacaaa
ggcgtaaccatcgatattcgcgacgagcgcttcgataaagatgacagttattgctacgag
ggtggcatcgtttccttcgtggaatatctgaacaaacggcatacggctcttcacgaaccg
gtgtttatcgagggataccgaaacgatgttaatatcgaagtagctattcaatataatgga
acgtacaaggaaaatattttttcttttgctaataatatcaatacggttgaaggcggtttt
catctaatcggattcaaggctgcgctgacccgatgcatcaaccaatatgcggttaacggc
aatcttcccaagaatctttcagcaaaaataagcggcgacgatgtcagggaaggcctgacg
gcgatcatctccgtaagaataaaatcacctcaattcgaaggacagaccaaaaccaaactg
ggcaacagtgaagtaaaaggacttgttgaatcgctcgtaaacgaaaaactcagcaccttc
atggaggaaaatcccgccgtagcccggaaaattatcgaaaaggcggtagatgcagccagg
gcaagggatgcggccaagcgggcgagggatctggcaagaaataaaggggcgctgatcgac
tccaccttgcccggcaaactggccgagtgccagatatccgatccggaagaaagggaactg
tttctggtcgaaggggattcggcaggaggatcggccaagcagggaagggatagaaagttt
caggcgattttgcccctgaggggtaaaattttaaatgtggagaaagcacgtttcgataaa
attctgcgcagtgaagagatcaagaatatcattactgccttgggaaccggtgttggcaag
gaagaatacaatatcgataaaatccgctaccacaaagtgattatcatgaccgatgccgat
gtggacggatcgcacatcagaactctgttgctaacttttttctatcgccagatgccggaa
ttggtcgataaaggatatttgtatattgctcagccgccgctttttaaaataggcaaggga
aaaagcgaatcctatatgcaggatgaaaatgaacttaacgattatatattaaaaaagagt
tgcgaaaaacgggaagtgcgcgtcgttaacggcaatatcgttctaaaagatcatgaactc
tttatttttctttgtaatttagctgaatacgatgcagctatcgccaaacttgaaaatcgc
ggatatcatgcttccattattgaaattctgctccaaagcgatgttcaggataaatatttt
ttccaggatcgaactaatatagaggcattaaaggaaacattcgaatccaaaggacatacc
gtagaaatggtttcctggaacgaagaagacgaacttttcgaactttctgtgcgttccgaa
aagcagagtaaattcgataaagcggtaattatcgggcgaagtgttatctattcttccgat
tttcaaaagtgtttgttgttgcataaaaaactgataaccgaagatcaaccgccatttgaa
gttattattaaagaaagtgatacacctcccgttgttctggaagacaagcgggttcttctg
cgtcatcttctcgaagacggtaagaaaggtattcacatccaacgatacaagggtcttggt
gaaatgaatcccgagcagttgtggcagacaaccatgcatccggacaagcgtaatctatta
aaagtaacagtagaagacgcggttgaatcagacgaaatttttacaatcctcatgggtgac
gaggtcgaaccgagacgggattttattcaaaataatgccctggaagtcagtacactggat
atttga
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