Desulfosarcina widdelii: DSCW_42040
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Entry
DSCW_42040 CDS
T06303
Name
(GenBank) 4Fe-4S ferredoxin
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00680
Methane metabolism
dwd01100
Metabolic pathways
dwd01120
Microbial metabolism in diverse environments
dwd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
DSCW_42040
Enzymes [BR:
dwd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
DSCW_42040
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
DSCW_42040
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
DSCW_42040
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
DSCW_42040
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
FAD_oxidored
NAD_binding_8
DAO
Pyr_redox_3
Fer4_20
Pyr_redox
FAD_binding_2
GIDA
Thi4
HI0933_like
AlaDh_PNT_C
NAD_binding_7
Fer4_10
FAD_binding_3
Fer4
Lycopene_cycl
Amino_oxidase
NAD_binding_9
Fer4_7
Fer4_21
Fer4_9
Fer4_6
Fer4_2
Fer4_8
Fer4_4
MurD-like_N
AMP-dom_DIP2-like
Motif
Other DBs
NCBI-ProteinID:
BBO76787
UniProt:
A0A5K7ZLA3
LinkDB
All DBs
Position
4533736..4538205
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AA seq
1489 aa
AA seq
DB search
MADRESTQDKDVVGSVLVVGGGIAGIQAALDLADSGYFVHMTETKSAIGGVMAQLDKTFP
TNDCSMCVISPKLVECGRHLNIDLMTLTEIEEVTGEVGNFTVRLRQNARYIEMDKCTACG
ECAKACPIETPNLFDEGLRDRKAAFKLYPQGMPSAYAIEKRGTAPCKATCPAHVSIQGYI
ALINDGRYKEALKLFRQDHPFPAVCGRVCHHPCESACTRNDVDQPLAIRELHRFLADYEK
KSGEVAIPEITAERRGEKVAVIGSGPAGITAAYYLLQQGYGVTVFEKQPEPGGMMRYGIP
EYRLPRDILAGEIDVVRQMGADIQCGVTFGADITLESLKADGYSACFMAIGLHGGRRLGV
ENEDVDGVLQGVDFLRDAAMGKQIELGEDVIVVGGGNVAIDVALTAKRKGAKNVTLICLE
KREEMPAWEHEIEEALESDIRIVNSFGPKSFYIDKNKRVSGIEFKTCTAVFDEDGRFNPA
YDEAECQPFFGDTIIISIGQSTDLTGIKEQGVAISRPGGLEADPVTLQTPIDWVFAGGDA
FYGPKSVVEAVACGKEAAESIHRFINGLDLTEGREKEWDFVKPEVSGEVNKPRTTVRCLD
PEARECNFLEVSFGFNEEEAKTEAQRCLKCGLCSECYQCVDACLAKAVNHDMVAEEKTIK
VGAIILAPGFTPFDPTAHKTYSYATHPNVVTSLEMERILSASGPFEGHLVRPSDHKEPDK
IAWLQCVGSRDINCSDHSYCSSVCCMYTNKQTVIAKEHSEKELDTAVFFMDMRTHGKEFE
KYYMRTKEEKGVRFIRSKVHTIDPVEDDNLRLRYITEEGELVEETFDMVVLAVGLAPNKE
SVSLAKTMGIDLNKHLHAATKTLQPVSSSRPGVFVCGAFQEPKDIPQSVMEASAAASTAT
SPLAEARGSLIRTKELPPEIDFSGQEPRIGVFVCNCGINIGGVADVPAVREYARTLPYVV
HVEDNLFTCSQDTQDKMKEVIKENNINRVIVASCSPRTHEPLFQETIRDAGLNKYLFEMA
NIRDQNTWVHMNNPDRATDKAKDLVRMAVAKAAYIEPLHQVRLDVIQKVLVVGGGVAGME
AALGVAEQGIQVFLVERGNGLGGVAHNLRATWQGEPVKPYLENLIEKVRNHEKVRVFMKT
EPVETTGIMGNFTTTLMTSGETLTETVVEHGATIIATGGKEYTPTEYLYGQNPNVLTHFE
IDAALEKDDARIAEAETVAFIQCVGSRTTERPYCSRLCCTHTLKNALELKKRKPDMTIYV
LYRDIRSYGFREELYKEARAQGVIFIRYNLEDNLPEVTDVDGGLRVKVRDHVLQLPIELN
PDLLVLATAVLPNENKDLFELFKVPVTAEGFLVEAHAKLRPVDFGSEGLFMAGLAHYPKP
LEETIAQARASVSRAMTILSKEAIMVGGVVAEVDPDKCAVCVTCVRTCPYNIPYIGEEGH
AVIEPAECHGCGCCVAECPGKAIQLKHFTDEQIVAKTAALFQKKKEAAA
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggcagatagagaaagcacccaagacaaggatgtcgtcggcagcgtgctggtggtgggc
ggcggcattgcaggcattcaggcggcccttgatctggccgattcgggctatttcgttcat
atgaccgagaccaagtcggccatcggcggcgtcatggctcaactggacaagacctttccc
accaatgactgctccatgtgtgtcatttcgccaaaattggtggagtgtgggcggcacctg
aacatcgacctgatgaccctgaccgaaatcgaagaggtcaccggcgaggtgggcaatttt
acggtacgcttgcgtcagaacgcccgctacatcgaaatggacaaatgtacggcctgcggg
gagtgcgccaaggcctgtcccatcgaaacgccgaacctgttcgacgagggcctgagggat
cgcaaggcggccttcaaactctatccccaggggatgccatccgcctatgccatcgaaaaa
cgggggacggcgccatgcaaggccacctgtccggcccatgtgagcatccagggatacatc
gccctgatcaacgacggccgctacaaagaggcgttgaagctgttccggcaggaccacccg
tttccggcggtttgcggtcgggtctgtcaccacccctgtgaaagcgcctgcacgcgcaac
gatgtggaccagccattggccatccgggaattgcatcgttttctggccgattacgaaaaa
aagagcggcgaggttgccataccggaaattaccgccgaaaggcgcggcgagaaggtggcc
gtgatcggctccggtccggccggcatcaccgcagcctattacctgctgcagcagggctac
ggggtaaccgttttcgaaaagcagcccgagccgggtggcatgatgcgctacggcatcccc
gaataccgcctgccccgggacatcctggccggcgaaatcgacgtggtgcggcagatgggc
gccgacatccagtgtggcgtgaccttcggagccgacatcaccctggaaagcctcaaggcc
gacggttatagcgcctgtttcatggctatcggcctgcacggcggccgccgcctgggcgtg
gaaaacgaggacgtcgacggcgttctccagggcgtcgattttctgcgagacgcggccatg
ggcaagcaaatcgagctgggtgaggatgtcatcgtcgtgggcggaggcaacgtggccatc
gacgtggccctgaccgccaagcgcaagggggccaaaaacgtcaccctgatctgtctggaa
aaacgggaagagatgcccgcctgggagcatgagatcgaagaggccctggaaagcgacatc
cggatcgtcaacagcttcggcccgaagtccttttacatcgacaagaacaagcgcgtttcg
ggtatcgaattcaagacctgtacggcggtcttcgatgaagacggtcgcttcaaccccgcc
tacgacgaagccgagtgccagccctttttcggcgatacaatcattatctccatcggccag
agcacggatcttacgggcatcaaggagcagggagtcgccatctcccgccccggggggctg
gaggccgatccggtcaccctgcagacccccatagactgggtctttgccggtggcgacgcc
ttttacggacccaagtcggtggtggaagccgtggcctgcggcaaggaggccgccgaaagc
atccaccgcttcatcaatggcctggacctgaccgaaggccgggaaaaggagtgggatttc
gtcaaacccgaggtgagcggcgaggtcaacaagccgcgtacaacggttcgctgcctggat
ccagaagcccgggagtgcaattttctggaagtgtctttcggttttaacgaagaagaggcc
aaaacggaagcccagcgctgcctcaaatgcggtctctgttccgagtgttatcagtgcgtg
gatgcctgtctggccaaagcggtcaaccacgacatggtagccgaagagaaaaccatcaaa
gtgggagccatcatcctggcaccggggttcacacccttcgatcccactgcccacaagacc
tattcttatgccactcaccccaacgtggtcaccagcctggagatggagcgcatcctgtcc
gcatccggtcccttcgagggccatctggtgcggccgtcggaccacaaggagccggacaag
atcgcttggctgcagtgcgtgggttcccgggacatcaactgctcggaccacagctactgc
tcgtcggtgtgctgcatgtacacaaacaaacagaccgtcattgccaaggagcacagcgaa
aaggaactggatacagccgtctttttcatggacatgcggacccacggcaaggagttcgag
aagtactatatgcggacgaaagaggagaaaggcgtacgcttcatccgctccaaggtacat
accatcgatccggtggaggatgacaacctgaggctgcgctacatcaccgaagaaggcgaa
ttggtcgaggaaaccttcgacatggttgtgctggcggtgggtctggcccccaacaaggag
tcggtgagcctggcgaagacgatgggaatcgatctcaacaaacacctgcatgccgccacc
aaaacgcttcaaccggtcagttcgtcccgaccgggtgtttttgtgtgcggtgctttccag
gagccaaaagacattccccaatcggtcatggaagcctcggccgcagcctccaccgccacg
agtccgctggccgaggcccgcgggtcactcatccggaccaaagaactgcccccggaaatc
gatttcagcggacaggaacccaggatcggcgtctttgtctgcaactgcggcatcaacatc
ggcggcgttgcagatgtgccggctgtaagagagtatgcccgcacgcttccgtatgtggtg
cacgtggaagacaatctcttcacctgcagtcaggatacccaggataagatgaaagaggtg
atcaaggaaaacaacatcaaccgggtgatcgtggcctcctgcagcccgcgaacccacgag
cctctgtttcaggagacgatccgcgacgcgggcctgaacaagtacctgttcgaaatggcc
aatatccgcgaccagaatacctgggtgcacatgaacaacccggaccgggccacggacaag
gccaaggacctggtgcgtatggcggtggccaaggcggcctacatcgagcccttgcatcag
gttagactggatgtgatccagaaggtgctggtggtcggcggcggtgtggccggcatggag
gcggccctgggcgttgccgagcagggcatccaggtctttctggtggaacgcggcaacgga
cttgggggcgtagcgcataatttgcgggccacctggcagggcgaaccagtaaaaccctat
cttgagaatttgattgaaaaggttcgcaaccatgagaaggttcgggttttcatgaaaacg
gagcccgtagagaccaccggcatcatgggtaatttcaccaccacgctgatgacctccggc
gaaacgttgaccgagacggtggtggagcatggcgccaccatcatcgccaccggcggcaag
gaatatacgcccaccgagtacttgtatgggcagaatcccaacgtactcacccactttgaa
atcgatgcagccctggaaaaagatgacgcccggattgccgaggccgaaaccgtggccttc
attcaatgcgtgggctcccgtacgacggagcggccctattgcagccgactgtgctgcaca
cataccttaaagaatgcgctggaactcaaaaagagaaaaccggacatgaccatttatgtt
ttgtaccgggatatccgttcctacgggttccgcgaggaactttacaaagaggccagagcg
cagggggtcatcttcatacgctacaacttggaagacaacctgcccgaggtcactgacgtc
gatggcggtttacgcgtgaaagtacgcgatcatgtgcttcagttgcccatagagctgaac
ccggatctgctggtgctggccacggcggtgctgcccaacgaaaacaaagacctgtttgag
ctgttcaaggtcccggtcaccgcggaaggtttcctggtggaggcccatgccaagctgcgg
ccggtggacttcggatcggaaggccttttcatggccggcctggcgcactaccccaaaccc
ctggaagaaaccattgcccaggcgagggcgtcggtatcccgggccatgacgatcctttcg
aaagaggccatcatggtgggcggtgtggtggccgaagtggacccggacaagtgcgctgtc
tgcgtcacctgcgtgcgcacctgcccttacaatatcccctatatcggcgaagagggtcat
gcggtgatcgaaccggccgaatgccacggctgcggctgttgcgtggccgaatgcccaggc
aaggcgatccagctcaagcattttaccgacgagcaaatcgttgccaagacagcggctctg
tttcagaagaaaaaagaggcggccgcctga
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