Desulfosarcina widdelii: DSCW_47760
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Entry
DSCW_47760 CDS
T06303
Symbol
rlmE
Name
(GenBank) ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dwd03009
]
DSCW_47760 (rlmE)
Enzymes [BR:
dwd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
DSCW_47760 (rlmE)
Ribosome biogenesis [BR:
dwd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DSCW_47760 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_31
Methyltransf_25
Methyltransf_23
MetW
Methyltransf_11
Methyltransf_12
PCMT
Methyltransf_9
CMAS
Motif
Other DBs
NCBI-ProteinID:
BBO77359
UniProt:
A0A5K7ZB05
LinkDB
All DBs
Position
complement(5144955..5145557)
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AA seq
200 aa
AA seq
DB search
MKQTSRKKNTWADHYTRQAKKENFAARSVYKLQEIQKKYSILSRGARVLDLGCAPGSWLQ
FAARQVGPGGLVVGIDLTPVTIQLPETVTVITGDVANLEGHLAELGQARFDAVLSDMAPA
TTGNRHVDQARSLGLCEMALYIAENHLVPGGHFVCKIFQSGDTKTFTEAVKSRFQRQNAL
RPKSTRKTSREVFIIGLQKR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaccagtcgcaagaagaatacctgggcggatcactacacccgtcaggccaaa
aaagaaaatttcgcggcccgctcggtctacaagcttcaggagatccagaaaaagtacagc
atcctcagccggggcgcgcgcgtcctggatctgggctgcgcaccgggatcgtggctgcag
ttcgccgcccggcaggtcggcccagggggcctggtggtcggcatcgacctgacgccggtc
accatccaattgccggaaaccgtgaccgtaattaccggcgatgtggccaacctggaggga
cacctggccgaactgggacaggcccgtttcgatgcggtcctcagcgacatggcgccggcc
acgacaggcaaccggcacgtggatcaggcccgctccctgggtttgtgcgaaatggccctt
tatatcgccgaaaatcacctggtgcccggcggccatttcgtatgcaagatttttcagagc
ggggacaccaagacatttaccgaggcggtcaaaagccgctttcagcgacagaacgcgcta
cgccccaaaagcacgcgcaagacaagccgggaagtatttatcatcggcctgcaaaagcgg
tga
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