Desulfosarcina widdelii: DSCW_50340
Help
Entry
DSCW_50340 CDS
T06303
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSCW_50340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dwd02000
]
DSCW_50340
Transporters [BR:
dwd02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DSCW_50340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
AAA_22
RsgA_GTPase
SMC_N
AAA_16
NB-ARC
AAA
AAA_14
AAA_28
AAA_23
AAA_29
AAA_30
Rad17
nSTAND_NTPase5
nSTAND3
ATPase_2
NACHT
AAA_18
MMR_HSR1
nSTAND1
DO-GTPase2
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BBO77617
UniProt:
A0A5K7ZN76
LinkDB
All DBs
Position
complement(5412540..5413484)
Genome browser
AA seq
314 aa
AA seq
DB search
MDLKVRHITKQYRSKTVLEDIGFDVGPHELVSIVGPSGVGKTTLLKIIAGLETADTGTVH
FSDPPTQHHPVIIVFQDYVLFPSMTVRENIGFGLQAQRMGKDKIDRQVDRMLDYFQIADK
GDHYPAQLSAGQQQRVAIARAMIVNPAVLLLDEPFANLDRNLKMETARFIRRTQQAFGIP
TISVTHDLEEAFSMSDRIGVLLDGRLRQFDTPKAVYFNSVSPQVARFLGPVNAIPRNLFP
IFRVPESETDAHLARPENLTITADAQGPGRIAEKTFAGHYTAYTVTIQDNAYTVYSQADQ
FTPGQRVALRLKPY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaaagtccgtcacataaccaaacaataccggagtaaaaccgttctggaagac
atcggcttcgatgtcgggccccatgaactggtatccatcgtcggaccttccggggtgggc
aagacgaccctgctcaagatcattgccgggctggaaaccgccgataccggcacggttcac
ttctccgatccgccgacgcagcaccacccggtgatcatcgtgttccaggattatgtcctc
tttccgtccatgacggtccgcgagaacatcggcttcgggctgcaggcccagcgaatgggc
aaagacaaaatcgaccggcaggtggaccgcatgctggactatttccagatcgccgacaaa
ggggaccactaccccgcccagctctccgccggtcagcagcagcgggtggccatcgcccgg
gccatgatcgtcaacccggcggtccttttgctggacgagccctttgccaacctggaccgc
aacctgaagatggaaaccgcccgcttcatccgccgcacccagcaggccttcggaattccc
accatcagcgtgacccacgacctggaagaagccttttccatgtccgaccgcatcggcgtt
cttctcgacggccggctgcgccagttcgacacgcccaaggcggtctatttcaactccgtc
tccccacaggtggcccgttttttaggtccggtgaacgcgatcccgagaaacctttttccg
atattccgggtgcctgaatccgaaaccgatgcgcatctggcccggcccgaaaatctgacc
ataaccgcagatgcccaagggcccgggcgcatcgccgagaaaacctttgccggccactac
accgcctataccgtaacgattcaggacaatgcctatacggtgtacagccaggccgaccag
tttacgcccggccagcgggtggcactgcgactcaaaccttactaa
DBGET
integrated database retrieval system
