Desulfosarcina widdelii: DSCW_53270
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Entry
DSCW_53270 CDS
T06303
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dwd03032
]
DSCW_53270
03036 Chromosome and associated proteins [BR:
dwd03036
]
DSCW_53270
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_53270
DNA replication proteins [BR:
dwd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSCW_53270
Chromosome and associated proteins [BR:
dwd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSCW_53270
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSCW_53270
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
UBA_Rad5
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
PT-TG
Motif
Other DBs
NCBI-ProteinID:
BBO77910
UniProt:
A0A5K7ZAV4
LinkDB
All DBs
Position
5731523..5731798
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AA seq
91 aa
AA seq
DB search
MNKIGLIQALREASGLPKTDVEKVVNLFFDTLAKALANGERVEIRGFFTLHVKAYKAFIG
RNPKTGKKVKIASKKLPVFKAGKALKEEMNP
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataagatagggctaatccaggcattgcgagaggccagcgggctgcctaaaaccgat
gtcgaaaaggtggtcaacctatttttcgataccctcgccaaggccctggccaatggcgaa
cgcgtcgaaatccgcggatttttcaccctgcacgtaaaagcgtacaaggccttcatcgga
cgtaatccaaaaaccggtaaaaaggtgaagatcgcatcgaaaaaactgcctgttttcaag
gccgggaaagcgttgaaggaagaaatgaatccttga
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