Desulfosarcina widdelii: DSCW_55180
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Entry
DSCW_55180 CDS
T06303
Symbol
glyA_2
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd00260
Glycine, serine and threonine metabolism
dwd00460
Cyanoamino acid metabolism
dwd00630
Glyoxylate and dicarboxylate metabolism
dwd00670
One carbon pool by folate
dwd00680
Methane metabolism
dwd01100
Metabolic pathways
dwd01110
Biosynthesis of secondary metabolites
dwd01120
Microbial metabolism in diverse environments
dwd01200
Carbon metabolism
dwd01230
Biosynthesis of amino acids
dwd01240
Biosynthesis of cofactors
dwd04981
Folate transport and metabolism
Module
dwd_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DSCW_55180 (glyA_2)
09102 Energy metabolism
00680 Methane metabolism
DSCW_55180 (glyA_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSCW_55180 (glyA_2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DSCW_55180 (glyA_2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DSCW_55180 (glyA_2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DSCW_55180 (glyA_2)
Enzymes [BR:
dwd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DSCW_55180 (glyA_2)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BBO78101
UniProt:
A0A5K7ZEB0
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All DBs
Position
complement(5953943..5955178)
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AA seq
411 aa
AA seq
DB search
MSHLKREDPCIATLIEKERIRIEETLDMIAAENHAPPSVMEVLGSILNTKTIEGYPGKRF
HAGCEHVDEIEDIAVQRAKELFGAEYVNVQPHSGTSANLAVYFSVLDVGDSVLSMGLPHG
GHLSHGHRASITSKCFEFTHYGVDPKTERLDYDRIRDLAYKVKPKMIVAGASSYPRLIDY
EKIAVIAREVNAYCLADMAHLAGLVAGKVIPSPVPCCDFVTFTTYKTLMGGRGGVILARE
EFGQRLNAAVFPGCQGTSAVNLIAAKGLIFKLAMEPRFIEIQKKTVENAKILAQSLNAQG
YRIVSGGTDNHQVLIDLTSKKLNGAMAETALESAGIVLNRNVIPSDVRTPGSVSGLRLGS
AGLTTRGMGHSEMITIAGMIDRVLSQSDDPTVLNKTNHQVKKLCRRYPVYA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatttgaaaagagaggatccctgcattgcaaccctgatcgaaaaggaaagaatc
cgtatcgaagagacgctcgatatgatagctgctgaaaatcatgcaccaccgtccgtcatg
gaagtccttgggtcgattttgaacaccaaaacaatagaaggatatcccggaaaacgattt
cacgccggctgtgaacatgttgacgaaatcgaggatatcgccgttcagcgggcaaaggag
ctcttcggcgcagaatatgtcaatgtgcagccccatagcggaacatcggccaacttggca
gtctatttttcggttctcgatgtgggcgacagcgtcctttccatggggcttccccacggt
ggccatctttcccacgggcaccgtgcttccatcaccagcaaatgcttcgaatttacgcat
tacggcgtggacccgaaaacggagcgcctcgattacgatcggatcagggacctggcttac
aaggtcaaacccaaaatgatcgtcgctggggccagttcctatccacgcttgatcgattac
gagaagatcgctgtcatcgccagggaggtcaacgcttattgccttgccgacatggcgcac
ttagccggtttagtggccggcaaggtgattcccagtccggtgccctgctgcgattttgtc
acctttacgacttacaaaaccttgatgggcggtcgtggcggcgtgatcctagccagggaa
gaattcggtcaacgcctgaacgcggccgtctttccgggatgtcaggggacgagcgcggtg
aacctgattgcggcaaaaggcctgattttcaaattggccatggagccccgcttcattgaa
atccagaaaaagactgtagaaaatgcaaagatactggcccaatcgcttaacgcccagggc
taccgcatcgtttccggtggtacagataatcaccaggtgctgattgacctcacttccaaa
aaattaaacggcgctatggctgaaactgcactggaatctgcaggcatcgttctgaatcga
aatgtgatccccagcgatgttcgtacgccgggcagcgtttcgggcctgcgtttaggaagt
gccggcctgaccactcgaggcatgggtcattcggaaatgatcacgattgcagggatgatc
gatagggtcctgtcgcagtcggacgatccgaccgtgctgaacaaaacaaaccatcaagtg
aaaaaactgtgccgccggtatccggtgtacgcctga
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