Desulfosarcina widdelii: DSCW_60020
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Entry
DSCW_60020 CDS
T06303
Symbol
hupB_3
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dwd03032
]
DSCW_60020 (hupB_3)
03036 Chromosome and associated proteins [BR:
dwd03036
]
DSCW_60020 (hupB_3)
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_60020 (hupB_3)
DNA replication proteins [BR:
dwd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSCW_60020 (hupB_3)
Chromosome and associated proteins [BR:
dwd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DSCW_60020 (hupB_3)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DSCW_60020 (hupB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
BBO78585
UniProt:
A0A5K7ZCT3
LinkDB
All DBs
Position
complement(6484165..6484428)
Genome browser
AA seq
87 aa
AA seq
DB search
MTKAELIEKIAKDADIPKATAKVAFDSALGGIKQGLKKRNSKVTLVGFGTFKNVYRKTRM
GRNPQTGEAIKIKGRSVVTFKPSKNLP
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagccgaactcatcgaaaaaatcgccaaggatgccgacatccccaaagccaca
gccaaagtggcttttgattctgcactgggtggcatcaagcaaggactcaagaaaaggaac
agcaaggtcactttggttggattcgggacgtttaaaaacgtttatcggaaaacccggatg
ggtcgcaatccacagaccggcgaagcgattaaaatcaaagggcgcagcgttgtgacattc
aagccgagtaaaaatctaccgtag
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