Desulfosarcina widdelii: DSCW_63410
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Entry
DSCW_63410 CDS
T06303
Symbol
ihfB-1_10
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dwd03032
]
DSCW_63410 (ihfB-1_10)
03036 Chromosome and associated proteins [BR:
dwd03036
]
DSCW_63410 (ihfB-1_10)
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_63410 (ihfB-1_10)
DNA replication proteins [BR:
dwd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DSCW_63410 (ihfB-1_10)
Chromosome and associated proteins [BR:
dwd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
DSCW_63410 (ihfB-1_10)
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
DSCW_63410 (ihfB-1_10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BBO78924
UniProt:
A0A5K7ZL06
LinkDB
All DBs
Position
complement(6847896..6848171)
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AA seq
91 aa
AA seq
DB search
MNKLELISALKTQADISKSEAAKVVQIFFDSMADAMADGERVEIRGLCSFFVKEYKSYTG
RNPKTGEKVTIKPKKLPFFKAGKELKERVDQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactggagctcatctccgctttgaagacccaagccgacatctccaagtccgaa
gcggcaaaagtggtccagatttttttcgacagcatggccgatgccatggccgacggcgaa
cgtgttgaaattcgcggcctgtgcagcttcttcgtgaaagagtacaagagttatacggga
agaaaccccaaaaccggcgagaaggtcaccatcaaacccaaaaagctcccttttttcaaa
gccggcaaagaactcaaggagcgggtggatcaataa
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