Desulfosarcina widdelii: DSCW_63450
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Entry
DSCW_63450 CDS
T06303
Symbol
yhaM
Name
(GenBank) HD family phosphohydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dwd03019
]
DSCW_63450 (yhaM)
Messenger RNA biogenesis [BR:
dwd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DSCW_63450 (yhaM)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Cas3_HD
HDOD
Motif
Other DBs
NCBI-ProteinID:
BBO78928
UniProt:
A0A5K7ZCR7
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Position
6852443..6853387
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AA seq
314 aa
AA seq
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MTKRFVSDLAAGSAVDEVFLLARRNMAHKKDGNPFLNVTLADRSGQVNGVVWDQVDRIAA
AAAEGDFVHVRAQVGEYRGSLQLVVKDMVRVPEEQVDAADFLAATTRDASQMLDRLKEMT
ARMQTPWLRALFDLFWADADFVAAYASAPAAKRMHHAYIGGLLEHTLSMAVLSETIAGHY
SGVDRDLLLAGVILHDVGKTRELEYSRRIDYTDEGRLLSHIVIGLSMLDEKLKQLRDFPE
DQAQLLKHMIVSHHGAREFGSPEPPKTIEAVLLNYIDEMDSRVNSIREYVAKDESDGAWT
SYHRLLERHFYKKR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaacgttttgtctccgatcttgccgcgggaagcgccgttgacgaagtttttctg
ctggcccggcgcaacatggcccacaaaaaagacggcaacccttttttaaatgtcaccctg
gcggatcgcagcggacaggttaacggggttgtgtgggatcaggtggaccgcattgccgcg
gcggcggccgaaggcgatttcgtgcatgtacgggcccaggtgggcgagtaccggggcagt
ttgcaactggtggtcaaagacatggtccgggtgccggaggagcaggtggatgccgccgat
tttctggccgccaccactcgtgacgccagtcagatgctcgaccggctcaaagagatgacc
gcccgcatgcagacgccctggctgcgggcgcttttcgaccttttctgggccgatgcggac
ttcgtggccgcctatgccagcgccccggcggccaagcgcatgcaccacgcctatatcggc
ggcctgctggagcacaccctctccatggcggttctttcagagaccatcgccgggcattac
agcggcgtcgaccgcgatctgctgttggccggagtgatcctccacgacgtggggaagacg
cgcgagctggaatattcccggcgcatcgattacaccgacgaagggcgcctgctcagccac
atcgtcatcggactttccatgctggacgaaaagctgaagcaactgcgcgattttccggaa
gaccaggcccaattgctcaaacacatgatcgtcagccaccacggcgcccgggagttcggc
tcccctgaaccgcccaagaccatcgaggcggtgttgttgaactacatcgacgagatggat
tcccgggtcaacagcattcgcgagtatgtggccaaagacgaatcggatggggcatggacg
tcgtatcaccggttgctggagagacatttttataaaaaacggtga
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