Desulfosarcina widdelii: DSCW_66180
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Entry
DSCW_66180 CDS
T06303
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
dwd
Desulfosarcina widdelii
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dwd01002
]
DSCW_66180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dwd01011
]
DSCW_66180
Peptidases and inhibitors [BR:
dwd01002
]
Cysteine peptidases
Family C82
DSCW_66180
Peptidoglycan biosynthesis and degradation proteins [BR:
dwd01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
DSCW_66180
BRITE hierarchy
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Paralog
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GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
BBO79201
UniProt:
A0A5K7ZHA4
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All DBs
Position
complement(7166500..7168269)
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AA seq
589 aa
AA seq
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MKGYRHTIIFFLAAMLFLSPRTATADNPHLREAAELKRLLAVEAPQYTAAPDAATDRLWS
PVVRFYRLIGYRTLWMDTDGLTRQGEGLLKVISSASENGLAPEAYFPPPLENPGSLPMGL
DESFGAMPPSPAVQMDMMLTDALLRYAADLARGRIAPQSLHMPWVSDQQLPDRDFPAELA
AAFNANRLWDFLDDLPPGQPAYAGLKTALQQYERIRSRGGWATVDGGPSLRRGDQDPRVP
ALRSRLLATADIQPYLPEAAEDFDAGVEAGVMRFQYRHGLTPDGVVGEKTLAALNVPVEK
RILQLKLNMERCRWYPDSFGQRYLLVNIPDYTLNIVENDWVIRRIRVIVGRPGRQTPNLS
GHLTYLEINPYWNVPAKIARKDILPKIKEDPDYLVRQGIKVFDSWDEAATPIDPESISWE
GVSKNYFPYRLRQDPSTLNALGQVKFIFPNSQAVYIHDTPSKSLFEKNRRGFSSGCVRLE
SPLELARYLLRDQSWDQSRLEETVESGRHRTVVLKKPIPVHLVYFTAWADSSGAVNFRQD
IYDQDRELELALIQRPAPTLFCRMEKPVGPMLAQCKHSQGTASAALPGI
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttacaggcatactatcatttttttcctggcggccatgcttttcctatccccg
cgtacggcgacggcggacaacccgcatcttcgggaggcagccgaactcaagcgcctgctg
gcagtcgaagcgccgcagtacaccgccgccccggatgccgccacggacagactttggagc
ccggtggtgcggttctaccgcctgatcggctaccggacgttatggatggacaccgatggg
ctcacccggcagggagaaggcctgttgaaggtcatttcgagcgcctcggaaaacggtctc
gcgccggaggcatattttccaccgcccctggagaatccgggcagcctgcccatgggattg
gacgaatcgttcggggcgatgccaccctctcctgccgttcagatggacatgatgctcacc
gatgcgctgctccgctacgccgccgatcttgcccggggtcgcattgcaccccagtccctt
cacatgccctgggtcagcgaccagcaacttccggaccgtgattttccggccgagttggcg
gcggcgttcaatgccaaccgcctgtgggattttctggatgacctgcctcccggccagccc
gcgtatgctggtctgaaaacagcgctgcaacaatatgaacggatccgttcgcgcggggga
tgggcaaccgtcgatggcggcccgtccctgcgacggggtgatcaggacccgcgcgtaccg
gcgctgcgcagccggctgcttgcaactgcagatatccaaccctacctgccggaagcggcg
gaagacttcgatgccggtgtcgaagcgggggtcatgcgcttccagtatcgccatggactg
acgcctgacggcgtggtcggcgaaaagacgctggcagcgctgaatgttcccgtcgaaaag
cgcatcctgcagttgaaattgaatatggaacgctgtcgctggtatccggacagtttcggc
caacgttacctgctggtcaacatccccgattatacgctgaatatcgtggaaaacgactgg
gtgatccgacggattcgcgtaatcgtcggccggccgggccgccagacccccaacctttcc
ggccacctgacctacttggaaatcaacccctattggaatgttccggcaaaaattgccagg
aaggatatcctaccgaagatcaaggaggaccctgactacctggtccggcagggaatcaag
gtgtttgacagttgggatgaagcagcaacgcccatcgacccggaatccatctcctgggaa
ggggtgtccaaaaactatttcccctatcgcctgcgccaggatccgtccacgctcaacgcc
ctgggccaggtgaagttcatcttccccaacagtcaggccgtttacatccacgacaccccg
tcaaaatcgctctttgaaaaaaaccgtcgcgggttctcctccggatgcgtgaggctcgag
tcccccctggaactggctcggtacctgcttcgcgaccagtcatgggaccaaagccgcctg
gaagagaccgtagaaagcggccgtcacagaaccgtggtcctcaaaaagcccatcccggtg
catctggtctatttcactgcctgggcggattcatcgggtgcggtaaacttcaggcaagac
atttacgaccaagaccgcgaactcgaactggctctgatccagcggcccgcgcccacccta
ttctgccgtatggagaagccggtcggtccgatgctggcccaatgtaagcattcacagggc
accgcatctgcggcgctaccgggcatttga
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